Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16587g00001 ATGAAGTACAATCCACGAGTCTCCAGCAGCCGCCGCAAGAGCCGCAAGGCTCATTTCACGGCGCCATCAAGCGTTCGCCGTGTTCTAATGAGCGCACCTCTTTCCGCCGATCTCCGATCCAAATACAACGTCCGTTCAATGCCAGTTCGCAAAGACGATGAAGTTCAG 168 0.5417 MKYNPRVSSSRRKSRKAHFTAPSSVRRVLMSAPLSADLRSKYNVRSMPVRKDDEVQ 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16587g00001 56 MobiDBLite consensus disorder prediction 1 20 - -
Trme16587g00001 56 MobiDBLite consensus disorder prediction 1 22 - -
Trme16587g00001 56 NCBIfam 50S ribosomal protein L24 8 56 IPR005756 GO:0003735|GO:0006412|GO:0015934
Trme16587g00001 56 Gene3D - 1 56 IPR014722 -
Trme16587g00001 56 PANTHER 60S RIBOSOMAL PROTEIN L26 FAMILY MEMBER 1 56 IPR005756 GO:0003735|GO:0006412|GO:0015934
Trme16587g00001 56 Pfam Ribosomal proteins L26 eukaryotic, L24P archaeal 8 50 IPR005756 GO:0003735|GO:0006412|GO:0015934
Trme16587g00001 56 SUPERFAMILY Translation proteins SH3-like domain 8 56 IPR008991 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16587g00001 1 56 Cytoplasmic Ribosomal Protein Gene Family AT5G67510 87.500 1.93e-31 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16587g00001 K02898 - mnt:21392729 98.2117