Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16574g00001 ATACTTATCCTTACAGCCTCAGGAAGCACAGCAATAACACTAGTATGGGCTCTCTCCCTTCTTATTAACCATCCAAAGGTCTTAAGACAAGCCCAACAAGAATTGGACAACAACATAGGAAAACACAAATGGGTCCAAGAATCTGACATCAAAGACCTAAAATATCTTCAATCAATTATTAAAGAGACACTTAGGTTATACCCACCAGCACCCTTAACTGGAATAAGAGAAGCCACTGATGATTGCCACGTGGCAGGATACCATGTTTCTAAAGGCACGCGTTTGCTTATTAACCTATGGAAATTACAAAGGGACCCACAAATATGGTCAAATCCTAATGAATTTCAACCTGAGAGATTTTACAACACTTTTGATCAAGTTGATTTTCAAAATCAAGATTTTGGGTATGTGCCATTTAGCTATGGAAGAAGGTCATGTGCTGGTGCAACATTTGGGTTGCAAGTGTTGCATTTGACTTTAGCTAGGTTGATTCAAGGGTTTGATATATACACAAAAGAAGGTGTTGTTGTTGATATGAATGAAGGATTGGGATTGGCTTTGCCTAAGGAAAATCCACTTGAGGTTATGTTACAACCACGTCTTCCATNGGAGCTTTATGAAAGTCTTTGA 630 0.3857 ILILTASGSTAITLVWALSLLINHPKVLRQAQQELDNNIGKHKWVQESDIKDLKYLQSIIKETLRLYPPAPLTGIREATDDCHVAGYHVSKGTRLLINLWKLQRDPQIWSNPNEFQPERFYNTFDQVDFQNQDFGYVPFSYGRRSCAGATFGLQVLHLTLARLIQGFDIYTKEGVVVDMNEGLGLALPKENPLEVMLQPRLPXELYESL 209
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16574g00001 209 SUPERFAMILY Cytochrome P450 2 200 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme16574g00001 209 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 139 148 IPR017972 GO:0005506|GO:0016705
Trme16574g00001 209 PANTHER CYTOCHROME P450 82C3-RELATED 2 206 - -
Trme16574g00001 209 Pfam Cytochrome P450 9 191 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme16574g00001 209 Gene3D Cytochrome P450 1 202 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme16574g00001 209 PRINTS E-class P450 group I signature 98 122 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme16574g00001 209 PRINTS E-class P450 group I signature 14 40 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme16574g00001 209 PRINTS E-class P450 group I signature 57 75 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme16574g00001 209 PRINTS E-class P450 group I signature 136 146 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme16574g00001 209 PRINTS E-class P450 group I signature 146 169 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme16574g00001 209 PRINTS P450 superfamily signature 5 22 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme16574g00001 209 PRINTS P450 superfamily signature 146 157 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme16574g00001 209 PRINTS P450 superfamily signature 58 69 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme16574g00001 209 PRINTS P450 superfamily signature 137 146 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16574g00001 Trme-Chr16574 142 771 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16574g00001 2 206 Cytochrome P450 AT4G31940 51.942 1.32e-74 232
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16574g00001 K17961 - gmx:100791088 325.094