Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1656g00001 ATGATGTCCAGATCGTATACAAACCTTTTAGATTTGGCTTCTGGGAATTTCCCGGCAATGGGGTCGGGATCGGGGAGGGAGTTTAAAGAACGAAGGCGGATGCCGAGGGTTATGAGTGTCCCAGGGATTGTCTCGGAGCTGGATGATGATCAGGCAGTAAGTGTGTCTTCTGATAATCCGTCAACTATTTCTACTGATCGAATTATCATTGTAGCAAATCAGCTTCCTTTGAAAGCAAAGAGAAGAGATGACAACAAAGGGTGGAGTTTTAGTTGGAATGAGGATTCCTTGCTCTTACAGCTTAAGGATGGATTTCCGGAAGAGATGGAGGTTCTTTATGTTGGGTCACTACGCATTGATGTTGATCCCGCTGAACAAGACGATGTATCACAGTATTTATTGGATAAATTCAAATGTGTTCCTACTTTTCTGCCTCCTGAAACTTTATCAAAATTTTATGATGGCTTTTGCAAAAGACAATTATGGCCACTTTTTCATTACAAGTTACCGTTTTCGACCGATAAAAGCCACCGTTTTGATCGCACATTGTGGGAAGCCTATGTTCTGGCAAACAAGCTTTTCTTTCAAAAGGTAGTAGAAATAATAAACCCGGAGGATGATTATATTTGGGTTCATGATTACCATTTAATGGTGCTGCCAACTTTTCTAAGAAGGCGTTTTAACAGGGTTAAAATGGGATTTTTCTTGCATAGCCCCTTTCCATCATCAGAGATATATCGGACTCTTCCTGTCAGGGAAGAGATAATGAAAGCTTTACTCAATTCTGATATCATTGGATTCCATACTTTTGACTATGCTCGTCATTTCCTTTCCTGTTGCAGTCGTATGTTGGGTCTAGAGTATCAGTCAAAGAGGGGCTATCTAGGATTGGAATATTATGGGAGGACTATCAGTATTAAGATCATGCCTGTTGGGATTCAGCTGGGTCGGATTGAATCTGTTATGAGAATGGCGGATGAAGAGTGTAAGGTAAGGGAGCTCAAACAGCAATTTGAAGGAAAAACCATTTTGCTTGGTATTGACGATATGGACATTTTTAAAGGCATAAATTTGAAGATTTTGGCTATGGAGCAGATGCTCAAACAACACCCCAAATGGCAAGGAAGGGCTGTTTTAGTCCAGATAGTTAATCCTGCTAGAGGTAGAGGGATACATGTAGATGAAATACATACTGAAATAGAAGAAAGCTGCAGAAGGATCAACAGAGTGTATGGACGACCTGGTTATGAACCTATTGTTTTTATTGATAGGTCGGTTCCAATTACTGAAAAAGTTGCCTTTTACAGCCTTGCTGAGTGTGTTATTGTCACAGCTGTAAGGGATGGGATGAACCTAACTCCTTATGAATATATAGTTTGTAGACAGGGAATATCTGGTTCCGAATCAAGTTCCAATGTGAATAACCCAAAGAAGAGCATGCTTGTCATATCAGAATTTATTGGGTGTTCTCCATCACTCAGTGGGGCGATCCGTATCAATCCATGGAATGTTGAATCAACTGCAGAGGCAATGAATGAAGCCATTTCAATGGGTGATGATGAGAAGCAGCTTCGGCACGAAAAGCATTATCGGTATGTCAGTACTCATGATGTGGCTTACTGGTCACGTAGTTTCTTGCAAGACATGGAGAGGGCTTGCACAGACCTTCTTAGGAAAAGATGTTGGGGAATAGGTCTGAGCTTTGGTTTCAGAGTTGTGGCACTTGATCCTAACTTTAAAAAGCTCTCAATTGATGCTATGGTTTCAGCTTACAAGAGGTCAAAGAGTAGGGCCATTTTGTTGGACTATGATGGTACTGTGATGCCACAAAACTCCATTAATAAAAGTCCAAGCAACGAGGTCATCTCTATTTTGGAAACTCTCTCTTTAGACCCCAAAAATACAGTTTTCATTGTTAGTGGACGGGGTAGGGATAGCTTAAGTGAATGGTTTACTCCCTGCAAAAAACTTGGAATTGCTGCAGAACATGGATACTTTTTGAGGTGGTCCAAGGATGGTGAATGGGAAATTTGTGGTAACTGCTCCGATTTTGGATGGATGCAGATTGCTGAACCTGTAATGAATCTATATACAGAGGCAACTGATGGTTCCAGCATCGAACGAAAGGAAAGTGCTTTGGTCTGGCAATACAGGGATGCAGACCTTGGTTTTGGATCTTCTCAGGCTAAGGAAATGTTAGATCATCTAGAAAGCGTTTTGGCCAATGAGCCTGTTTCTGCAAAGAGTGGCCAGTTTATTGTTGAAGTGAAGCCTCAG 2277 0.4133 MMSRSYTNLLDLASGNFPAMGSGSGREFKERRRMPRVMSVPGIVSELDDDQAVSVSSDNPSTISTDRIIIVANQLPLKAKRRDDNKGWSFSWNEDSLLLQLKDGFPEEMEVLYVGSLRIDVDPAEQDDVSQYLLDKFKCVPTFLPPETLSKFYDGFCKRQLWPLFHYKLPFSTDKSHRFDRTLWEAYVLANKLFFQKVVEIINPEDDYIWVHDYHLMVLPTFLRRRFNRVKMGFFLHSPFPSSEIYRTLPVREEIMKALLNSDIIGFHTFDYARHFLSCCSRMLGLEYQSKRGYLGLEYYGRTISIKIMPVGIQLGRIESVMRMADEECKVRELKQQFEGKTILLGIDDMDIFKGINLKILAMEQMLKQHPKWQGRAVLVQIVNPARGRGIHVDEIHTEIEESCRRINRVYGRPGYEPIVFIDRSVPITEKVAFYSLAECVIVTAVRDGMNLTPYEYIVCRQGISGSESSSNVNNPKKSMLVISEFIGCSPSLSGAIRINPWNVESTAEAMNEAISMGDDEKQLRHEKHYRYVSTHDVAYWSRSFLQDMERACTDLLRKRCWGIGLSFGFRVVALDPNFKKLSIDAMVSAYKRSKSRAILLDYDGTVMPQNSINKSPSNEVISILETLSLDPKNTVFIVSGRGRDSLSEWFTPCKKLGIAAEHGYFLRWSKDGEWEICGNCSDFGWMQIAEPVMNLYTEATDGSSIERKESALVWQYRDADLGFGSSQAKEMLDHLESVLANEPVSAKSGQFIVEVKPQ 759
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1656g00001 759 FunFam Alpha,alpha-trehalose-phosphate synthase 321 534 - -
Trme1656g00001 759 Pfam Glycosyltransferase family 20 67 550 IPR001830 GO:0003824|GO:0005992
Trme1656g00001 759 CDD GT20_TPS 67 550 IPR001830 GO:0003824|GO:0005992
Trme1656g00001 759 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 60 319 - -
Trme1656g00001 759 Gene3D Glycogen Phosphorylase B; 321 534 - -
Trme1656g00001 759 SUPERFAMILY HAD-like 597 759 IPR036412 -
Trme1656g00001 759 Pfam Trehalose-phosphatase 600 759 IPR003337 GO:0003824|GO:0005992
Trme1656g00001 759 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 66 554 - -
Trme1656g00001 759 FunFam alpha,alpha-trehalose-phosphate synthase [UDP-forming] 6 596 713 - -
Trme1656g00001 759 Gene3D - 596 695 IPR023214 -
Trme1656g00001 759 Gene3D Glycogen Phosphorylase B; 60 320 - -
Trme1656g00001 759 PANTHER TREHALOSE-6-PHOSPHATE SYNTHASE 35 758 IPR001830 GO:0003824|GO:0005992
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1656g00001 Trme-Chr1656 141 2852 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1656g00001 1 759 Trehalose Biosynthesis Gene Families AT1G06410 77.470 0.0 1237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1656g00001 K16055 - gmx:100811463 1415.21