Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme165653g00001 GTGTCATCTTTGGCTTCATTCATGTCCAATCAAGAAACAAGTTTTGTGACTTTGGGTCAGCGGGTTTTAGCAAATCCTTTGAAGGTTCGTATGCATTATGGTCATCCTGATGTTTTTGATAGAGTGTTCCACATAACCCGTGGTGGTATCAGCAAGGCTTCCCGTGTTATCAATATTAGTGAAGATATCTACTCAGGTATATCAGTTGATTCTGCTTCATAG 222 0.4009 VSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSGISVDSAS 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme165653g00001 73 Pfam 1,3-beta-glucan synthase component 1 68 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Trme165653g00001 73 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 67 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme165653g00001 Trme-Chr165653 119 431 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme165653g00001 1 68 Cell Wall Biosynthesis AT3G07160 91.176 3.36e-39 134
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme165653g00001 K11000 - egr:104433802 133.65