Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme165595g00001 ATGGCATATGTTCATGGTCTGGGATTGATCCACAGGGACTTGAAATCTGACAACCTGTTGATTTTTGGTGACAAGTCAATCAAAATTGCTGACTTTGGAGTCGCCCGGATTGAGGTGCAAACTGAAGGAATGACTCCCGAGACTGGAACATACCGTTGGATGGCTCCGTAA 171 0.462 MAYVHGLGLIHRDLKSDNLLIFGDKSIKIADFGVARIEVQTEGMTPETGTYRWMAP 56
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme165595g00001 56 ProSiteProfiles Protein kinase domain profile. 1 56 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme165595g00001 56 ProSitePatterns Serine/Threonine protein kinases active-site signature. 9 21 IPR008271 GO:0004672|GO:0006468
Trme165595g00001 56 PANTHER SERINE-THREONINE PROTEIN KINASE 1 56 - -
Trme165595g00001 56 Gene3D Transferase(Phosphotransferase) domain 1 1 56 - -
Trme165595g00001 56 Pfam Protein kinase domain 1 56 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme165595g00001 56 SUPERFAMILY Protein kinase-like (PK-like) 1 56 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme165595g00001 Trme-Chr165595 1 171 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme165595g00001 1 56 MAP Kinase Kinase Kinase AT2G24360 91.071 3.08e-32 112
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK TKL-Pl-4 Trme165595g00001 Pkinase 7.4e-16 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme165595g00001 - - qsa:O6P43_003864 117.857