Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme165491g00001 ATGGGTTATAAAGGTGGTGGTCTTGGGAAGAATGAGCAGGGTATTTTGAATCCTATTGAGGCAAAATTAAGGGCTAAGAATTCTGGTCTTGGATTTAATGAATCAAAGAAGACTACAATGCCGTTGCCCACTTTGCAGACGGAAAAGAAGAATGCATCGGGAGGAGATGTGCAGCCTACAGTTGGAAGATCGAGAGAACGTTCGTGGTTAAAGCAGTTGAAGAA 224 0.4286 MGYKGGGLGKNEQGILNPIEAKLRAKNSGLGFNESKKTTMPLPTLQTEKKNASGGDVQPTVGRSRERSWLKQLK 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme165491g00001 74 SMART G-patch_5 1 33 IPR000467 GO:0003676
Trme165491g00001 74 PANTHER TUFTELIN-INTERACTING PROTEIN 11-RELATED 1 72 IPR045211 GO:0000390
Trme165491g00001 74 ProSiteProfiles G-patch domain profile. 1 35 IPR000467 GO:0003676
Trme165491g00001 74 MobiDBLite consensus disorder prediction 31 58 - -
Trme165491g00001 74 Pfam G-patch domain 1 31 IPR000467 GO:0003676
Trme165491g00001 74 MobiDBLite consensus disorder prediction 30 74 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme165491g00001 Trme-Chr165491 1 224 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme165491g00001 1 34 C2H2 Transcription Factor Family AT5G26610 55.882 9.18e-06 39.7
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme165491g00001 K13103 - gmx:100781621 105.145