Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme165454g00001 ATGGCTAGTGATTCTAAAATGATAAATTTAGCATTGAGAGATTGTGATTTTGTGTTTGAAGGGTTGGAATCAATTGTTGATGTTGGTGGTGGAACAGGAACAACNNNNNTNNNNNNNNNNGAGAGATTTCCTAAGTTGAAATGTGTTGTGTTTGATAGACCACAGGTTGTTGAGAATTTAACTGAAAGTGACAATTTGACATATGTTGGTGGAGACATGTTCCAATCTATTCCTAATGGTGATGCTGTTCTTCTTAAG 258 0.3372 MASDSKMINLALRDCDFVFEGLESIVDVGGGTGTTXXXXXERFPKLKCVVFDRPQVVENLTESDNLTYVGGDMFQSIPNGDAVLLK 86
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme165454g00001 86 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 86 IPR016461 GO:0008168
Trme165454g00001 86 Gene3D Vaccinia Virus protein VP39 1 86 IPR029063 -
Trme165454g00001 86 PANTHER O-METHYLTRANSFERASE 1 85 IPR016461 GO:0008168
Trme165454g00001 86 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 11 85 IPR029063 -
Trme165454g00001 86 Pfam O-methyltransferase domain 9 86 IPR001077 GO:0008171
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme165454g00001 Trme-Chr165454 129 386 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme165454g00001 19 86 Monolignol Biosynthesis Gene Families AT5G54160 48.529 2.87e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme165454g00001 - - ag:AAC49926 137.887