Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme165281g00001 TTCAACTATGATTCAACGACACACAACGTGGTTGCGGTCGACAAAAGTGGACACAGCAGCTGCAAGGCGGCGGGAGGTGCTAAAGTGTTCAGTTCAGGGAAAGACCAAATCAGGCTAGCAAGAGGGCAGAACTACTTCATATGCAGNATTCCTGGTCACTGCCAATCTGGGATGAAGGTTTCCATCATTGCAGTCTAG 198 0.4899 FNYDSTTHNVVAVDKSGHSSCKAAGGAKVFSSGKDQIRLARGQNYFICXIPGHCQSGMKVSIIAV 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme165281g00001 65 PANTHER BLUE COPPER PROTEIN 1 62 IPR039391 GO:0009055
Trme165281g00001 65 Pfam Plastocyanin-like domain 1 58 IPR003245 GO:0009055
Trme165281g00001 65 Gene3D - 1 64 IPR008972 -
Trme165281g00001 65 SUPERFAMILY Cupredoxins 1 63 IPR008972 -
Trme165281g00001 65 ProSitePatterns Type-1 copper (blue) proteins signature. 42 58 IPR028871 -
Trme165281g00001 65 ProSiteProfiles Phytocyanin domain profile. 1 65 IPR003245 GO:0009055
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme165281g00001 Trme-Chr165281 68 265 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme165281g00001 1 65 Phytocyanin Superfamily AT1G17800 40.909 1.90e-13 58.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme165281g00001 - - gmx:100788635 117.857