Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme165005g00001 AATGCTGAAGATGATATAGTTTTTCCTGCATTGGAATCCAAAGAGACACTTCATAACGTGAGCCATTCGTACACGCTGGACCATAAGGCAGAAGAAAAGTTATTTGAAGATATTTCTTGCGTTCTTTCTGTCCTTCATGAAGCAATGCAGAGGACCCATATGTCAGAGGATTTAAGCGAAAGTAATTTGGGAATATCTGTTGTCAATGATAGTGATGATATCAGAAAGTACAATGAGCTTGCAACTAAGCTTCAAGGGATGATGTGTAAATCTATACGAGTGACCCTGGATCAGCATATTTTCAGGGAAGAGCTCGAGCTCTGGCCATTGTTTGGAAAACATTTCACTGTGGAAGAACAAGACAAGATAGTGGGCCGGATAATTGGAACTACAGGGGCTGAAGTTCTCCAATCAATGTTACCATGGGTGACTTCTGCACTTACCCAAGATGAACAGAACAAAATGATGGACACATGGAAACAAGCAACTAAGAATACAATGTTTAATGA 509 0.4008 NAEDDIVFPALESKETLHNVSHSYTLDHKAEEKLFEDISCVLSVLHEAMQRTHMSEDLSESNLGISVVNDSDDIRKYNELATKLQGMMCKSIRVTLDQHIFREELELWPLFGKHFTVEEQDKIVGRIIGTTGAEVLQSMLPWVTSALTQDEQNKMMDTWKQATKNTMFN 169
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme165005g00001 169 CDD Hr-like 2 109 - -
Trme165005g00001 169 Gene3D nmb1532 protein domain like 1 167 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme165005g00001 Trme-Chr165005 2 510 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme165005g00001 1 169 C2H2 Transcription Factor Family AT3G18290 74.419 1.40e-82 263
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme165005g00001 K16276 - gmx:100791354 304.679