Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16482g00001 GATGTAATCAGGAGTTACATCGCTGCACATAAGTCGTTGTCGGTGGGGTCATTACCGACTGCGACTATTGTGTTTAAGGGAACTAGGCTTGGGGTTAGGCCAGCTCCTGTGGTGGCATCGTTTTCTGCCCGAGGGCCTAACCCTGAATCGCCTGAGATTTTGAAACCAGATGTTATAGCACCTGGTTTAAACATTCTAGCTGCTTGGCCTGATCGAGTTGGACCTTCTGGCATTCCTTCTGATCATAGAAGGACTGAATTCAACATATTGTCCGGTACATCGATGGCTTGTCCTCATGTTTCCGGTTTAGCCGCTTTGTTGAAAGCGGCTCACCCTGATTGGAGTCCAGCTGCTATCAAATCAGCTCTTATGACCACCGCGTATACTGTCGATAACAAGGGCGATCCAATGTTGGATGAGTCTAACGGTAACGTTTCATCGGTGTTTGATTACGGAGCTGGACATGTTCATCCAGAGAAAGCATTGGATCCTGGTTTGGTTTATGATATTTCAGTCTATGATTATGTTGATTTCTTGTGTAACTCAAATTACACCACCAAGAATATTAAAGTGATCACAAGGAAAATTGCAGATTGTAGTGGTGCTAAAAAAGCTGGACATTCCGGTAACTTGAATTATCCAACATTATCTGCAGTTTTTCAACAATATGGTAAACATAAAATGTCTACACATTTTATTAGGACTGTGACCAATGTTGGTGACCCAAATTCAGTTTATAAAGTAACAATTAAACCACCTGAGGGAATGGTGGTAACTGTGAAGCCAGATAAGTTGTCTTTTAGAAGGGTTGGTCAGAAATTGAATTTTCTTGTTAGGGTACAAACTAGGGAAGTTAAGCTATCACCTGGAAGTTCTTTAGTGAAGAGTGGTTCCATAATTTGGTCTGATGGAAAACACATTGTCACAAGTCCTTTGGTTGTGACAATGCAGCAACCTCTTGATTAG 966 0.4193 DVIRSYIAAHKSLSVGSLPTATIVFKGTRLGVRPAPVVASFSARGPNPESPEILKPDVIAPGLNILAAWPDRVGPSGIPSDHRRTEFNILSGTSMACPHVSGLAALLKAAHPDWSPAAIKSALMTTAYTVDNKGDPMLDESNGNVSSVFDYGAGHVHPEKALDPGLVYDISVYDYVDFLCNSNYTTKNIKVITRKIADCSGAKKAGHSGNLNYPTLSAVFQQYGKHKMSTHFIRTVTNVGDPNSVYKVTIKPPEGMVVTVKPDKLSFRRVGQKLNFLVRVQTREVKLSPGSSLVKSGSIIWSDGKHIVTSPLVVTMQQPLD 321
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16482g00001 321 ProSitePatterns Serine proteases, subtilase family, serine active site. 92 102 IPR023828 -
Trme16482g00001 321 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 4 314 IPR045051 -
Trme16482g00001 321 Gene3D - 13 31 - -
Trme16482g00001 321 SUPERFAMILY Subtilisin-like 12 166 IPR036852 GO:0004252|GO:0006508
Trme16482g00001 321 Gene3D Peptidase S8/S53 domain 32 175 IPR036852 GO:0004252|GO:0006508
Trme16482g00001 321 FunFam Subtilisin-like protease SBT1.5 179 317 - -
Trme16482g00001 321 Pfam Subtilase family 34 144 IPR000209 GO:0006508|GO:0008236
Trme16482g00001 321 ProSiteProfiles Serine proteases, subtilase domain profile. 1 162 - -
Trme16482g00001 321 Pfam Fibronectin type-III domain 210 314 IPR041469 -
Trme16482g00001 321 Gene3D - 179 317 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16482g00001 Trme-Chr16482 1 966 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16482g00001 1 320 Subtilisin-like Serine Gene Family AT3G14240 76.875 0.0 523
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16482g00001 - - gsj:114418214 553.903