Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme164809g00001 ATGACTGTTCTAATCCCAAGGAACACCACCATTCCAACAAAGAAAGAGCAGGTTTTCTCAACCTACTCTGACAACCAGCCTGGTGTGTTGATCCAGGTCTTTGAAGGAGAGAGGACCAGGACTAGGGATAACAATTTGTTGGGCAAGTTTGAACTTTCTGGCATTCCTCCTGCTCCTAGGGGTGTTCCCCAGATCACTGTTTGCTTTGACATTGATGCCAATGGTATCTTAAATGTCTCTGCTGAAGACAAGACTACTGGACAGAAGAACAAGATTACTATCACCAATGACAAGGGTAGGCTGTCGAAGGAAGATATTGAGAAGATGGTTCAAGAGGCYGAGAAATACAAATCTGAAGATGAAGAGCATAAGAAGAAGGTTGAGGCCAAGAATGCTTTGGAAAACTATGCATACAACATGAGGAACACCATTAAGGATGATAAGATTGCTGGCAAACTT 459 0.4292 MTVLIPRNTTIPTKKEQVFSTYSDNQPGVLIQVFEGERTRTRDNNLLGKFELSGIPPAPRGVPQITVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEDIEKMVQEAEKYKSEDEEHKKKVEAKNALENYAYNMRNTIKDDKIAGKL 153
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme164809g00001 153 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 128 153 IPR029048 -
Trme164809g00001 153 Pfam Hsp70 protein 1 147 IPR013126 GO:0005524|GO:0140662
Trme164809g00001 153 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 1 151 IPR029047 -
Trme164809g00001 153 Coils Coil 106 126 - -
Trme164809g00001 153 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 1 134 IPR029047 -
Trme164809g00001 153 PANTHER HEAT SHOCK PROTEIN 70KDA 1 146 IPR013126 GO:0005524|GO:0140662
Trme164809g00001 153 FunFam Heat shock 70 kDa 1 130 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme164809g00001 Trme-Chr164809 1 459 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme164809g00001 1 153 Calmodulin-binding Proteins AT3G12580 94.118 8.33e-101 301
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme164809g00001 K03283 - mus:103995448 302.367