Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme164689g00001 CAATCATCGGTTGTTCCGTTTACGAAGCAGCAGAAGGTGAGTTCTACTATTGCCGGAGACGACGCAAGCAACCAGCTTCAGCAGAGTATATTTGATCAACTATACAAAACTGCTGAGCTGATAGAAGCTGGTAATCCGGTTCAAGCGCAAGGGATATTGGCGCGGCTCAATCACCAGCTCTCACCAATTGGTAAGCCTTTTGAAAGGGCTTCTTTCTATGTGAAGGAAGCCTTACAGTTAATGCTTCATTCGAACGGTAACAATCTCAATGCTTTTTCACCGATTAGTTTCATATTCAAAATCGGAGCTTACAAGTCTTTTTCCGAGATATCGCCTGTTCTTCAGTTCGCCAACTTTACTTGTAACCAAGTCCTAATTGAAGCCTTGGAAAGGTTCGACCGAATTCACATTGTTGATTTCGACATAGGGTTTGGAGTACAATGGTCTTCTTTTATGCAAGAGCTTGTGTTAAGAGGTAATGGTATACCTTCACTTAAGATTACTGCTGTTG 511 0.4227 QSSVVPFTKQQKVSSTIAGDDASNQLQQSIFDQLYKTAELIEAGNPVQAQGILARLNHQLSPIGKPFERASFYVKEALQLMLHSNGNNLNAFSPISFIFKIGAYKSFSEISPVLQFANFTCNQVLIEALERFDRIHIVDFDIGFGVQWSSFMQELVLRGNGIPSLKITAV 170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme164689g00001 170 ProSiteProfiles GRAS family profile. 21 170 IPR005202 -
Trme164689g00001 170 Pfam GRAS domain family 32 170 IPR005202 -
Trme164689g00001 170 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 31 170 IPR005202 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme164689g00001 Trme-Chr164689 1 511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme164689g00001 30 168 GRAS Transcription Factor Family AT4G00150 65.248 5.52e-52 172
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GRAS Trme164689g00001 GRAS 6.5e-38 CL0063
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme164689g00001 - - psat:127101146 296.975