Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16465g00001 ATGGGGTCTCAAGGTGGGGGAGATGGTAGTGGAAAACGGTCACAACTCCACTCTCTTGTGCGGCAAAATTCGATGTACAGTCTCACACTTGATGAAGTTCAAAATCAATTAGGTGACTTAGGGAAGCCACTAAGTAGTATGAACTTAGACGAGCTTCTTAAAAATGTATGGACTGTTGAGGTGAACCAGTCCACGAGTACGGATAATGAAGGGACAACACAAGGTAGTCAAGCTTCTCTACAACGTCAAGCTAGTCTGTCGTTAAAAGCTGCGTTAAGCATGAAGACTGTGGATGAGGTTTGGAGAGATATCCAACAAACAAAAGACAATGAGGAGAAGAAGTCACGCGAGAGACAACCTACTTTAGGAGAGATGACATTGGAGGATTTCTTGGTGAAAGCAGGTATTGTTGCAGAAGCATCTTCTGATAAAACCAATACCGATACTAAAGCTGGGATTGATTCAAATGTAGCAGTATCACAGTTTCCTCCGCAAGGTCAGTGGATACAGTATCCACAACCGCAACCACAATATCAGCATCTACAACAAAGTTCAATGGGGATTTATATGCCTAGCCAGGGTATCGCACAACCGTTACACTTGGGGGCTGGTGCTTCAATGGAGATTCCGTTCGCAGATAGTCATATGGCACTGGCTGCACCTCTTATGGGAACAGTGTTGGATACGCAGATATCCGGAAGAAAAAGGAGCACTACAGAGGATATGGTGGAGAAGACTGTTGAGAGAAGGCAGAAAAGGATGATCAAGAATCGGGAATCTGCTGCCCGTTCAAGAGCAAGGAAACAGACCTGA 813 0.449 MGSQGGGDGSGKRSQLHSLVRQNSMYSLTLDEVQNQLGDLGKPLSSMNLDELLKNVWTVEVNQSTSTDNEGTTQGSQASLQRQASLSLKAALSMKTVDEVWRDIQQTKDNEEKKSRERQPTLGEMTLEDFLVKAGIVAEASSDKTNTDTKAGIDSNVAVSQFPPQGQWIQYPQPQPQYQHLQQSSMGIYMPSQGIAQPLHLGAGASMEIPFADSHMALAAPLMGTVLDTQISGRKRSTTEDMVEKTVERRQKRMIKNRESAARSRARKQT 270
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16465g00001 270 ProSitePatterns Basic-leucine zipper (bZIP) domain signature. 252 267 IPR004827 GO:0003700|GO:0006355
Trme16465g00001 270 MobiDBLite consensus disorder prediction 1 20 - -
Trme16465g00001 270 MobiDBLite consensus disorder prediction 233 270 - -
Trme16465g00001 270 PANTHER CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED 20 269 IPR043452 GO:0003700|GO:0045893
Trme16465g00001 270 MobiDBLite consensus disorder prediction 234 270 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16465g00001 Trme-Chr16465 521 1434 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16465g00001 18 269 bZIP Transcription Factor Family AT3G56850 49.042 2.36e-63 199
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16465g00001 K14432 - gmx:100101875 344.739