Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme164646g00001 ATGTATAGAGTTCAGTCTACTTGGTCTGTTTATGATAAGAAGCTGAGAGAAGAAATWATMATATCAGTRGGAAATACTTTGTTGCCTGTATATGGAATCTTCATTGGGAGGTTCCGGGATTGTTTTGGTGTTCATGCTAATAAGTATATTGAATATGGAATGTTTGAGATTCAAGATCGACTCAACAATTTGTTTCTGGTTCCCTCCATATTCGAGGCATGTCGGACACTAAATGTAG 238 0.3613 MYRVQSTWSVYDKKLREEIIISVGNTLLPVYGIFIGRFRDCFGVHANKYIEYGMFEIQDRLNNLFLVPSIFEACRTLNV 79
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme164646g00001 79 PANTHER EXOCYST COMPLEX PROTEIN EXO70 1 65 IPR004140 GO:0000145|GO:0006887
Trme164646g00001 79 Gene3D Exocyst complex component Exo70 1 67 - -
Trme164646g00001 79 SUPERFAMILY Cullin repeat-like 1 65 IPR016159 -
Trme164646g00001 79 Pfam Exo70 exocyst complex subunit 1 62 IPR046364 GO:0000145|GO:0005546|GO:0006887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme164646g00001 Trme-Chr164646 33 342 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme164646g00001 3 65 EXO70 exocyst subunit family AT5G58430 49.231 4.87e-17 72.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme164646g00001 - K07195 lja:Lj0g3v0078039.1 103.605