Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme164633g00001 ATGGGAGATCATAATAATAATAACAACAATGTTAATCTTCCACCCGGTTTTCGATTTTATCCAACAGATGAAGAACTTGTCGTCCATTTNNTNNNNNNNNNNGCTTCCCTTTTACCTTGTCATCCAGATGTTATTCCTGATCTTGACCTCTATCCATTTGATCCATGGCAACTTCAAG 178 0.3483 MGDHNNNNNNVNLPPGFRFYPTDEELVVHXXXXXASLLPCHPDVIPDLDLYPFDPWQLQ 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme164633g00001 59 Pfam No apical meristem (NAM) protein 14 58 IPR003441 GO:0003677|GO:0006355
Trme164633g00001 59 SUPERFAMILY NAC domain 8 58 IPR036093 GO:0003677|GO:0006355
Trme164633g00001 59 PANTHER NAC TRANSCRIPTION FACTOR 56 13 58 - -
Trme164633g00001 59 Gene3D NAC domain 22 59 IPR036093 GO:0003677|GO:0006355
Trme164633g00001 59 ProSiteProfiles NAC domain profile. 13 59 IPR003441 GO:0003677|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme164633g00001 Trme-Chr164633 33 210 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme164633g00001 1 58 NAC Transcription Factor Family AT1G61110 51.724 1.09e-14 63.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme164633g00001 - - csav:115725662 103.219