Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme164589g00001 TTTCAGGGAGCTGTTGCTGCTCTTCACATGGTTCATTGCTTTCACTTGGCTGGTTTTCCCAAAGGCCTAATCAGCTGTGTTACCGGAAAAGGCTCAGAAATTGGTGACTTTCTTACAATGCATCCAGGAGTGAACTGTATAAGCTTCACTGGTGGAGATACTGGCATTGCAATTTCAAAGAAGGCAGGAATGATTCCTCTACAAATGGAATTGGGAGGAAAAGATGCTTGCATTGTACTTGAGGATGCTGATCTTGATTTGGTTGCTGCAAACATTATAAAAGGAGGTTTTTCATACAGGTGA 303 0.4224 FQGAVAALHMVHCFHLAGFPKGLISCVTGKGSEIGDFLTMHPGVNCISFTGGDTGIAISKKAGMIPLQMELGGKDACIVLEDADLDLVAANIIKGGFSYR 100
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme164589g00001 100 SUPERFAMILY ALDH-like 5 98 IPR016161 GO:0016491
Trme164589g00001 100 Gene3D Aldehyde Dehydrogenase; Chain A, domain 1 4 71 IPR016162 GO:0016491
Trme164589g00001 100 Gene3D Aldehyde Dehydrogenase; Chain A, domain 2 74 99 IPR016163 GO:0016620
Trme164589g00001 100 ProSitePatterns Aldehyde dehydrogenases glutamic acid active site. 69 76 IPR029510 GO:0016491
Trme164589g00001 100 PANTHER ALDEHYDE DEHYDROGENASE 2 99 - -
Trme164589g00001 100 Pfam Aldehyde dehydrogenase family 4 99 IPR015590 GO:0016491
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme164589g00001 Trme-Chr164589 1 388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme164589g00001 2 99 Aldehyde Dehydrogenase Gene Family AT2G24270 92.857 3.70e-62 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme164589g00001 K00131 - ming:122082681 202.986