Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16457g00001 GATCTTTACAAAAGCATATTAAGGGGTGGGAACTCTAACGCTGACAATCTTTTCTCTGGTGCATCTGCTAATTTTATTGCTGGGGCTGGAGCAGGTTGTACATCGCTTATCTTGGTATACCCCCTTGATATCGCACACACCCGCCTTGCTGCTGACATCGGAAGGACAGAAGTGCGTCAATTCCGAGGCATTTACCATTTCTTAGCCACTATATTCGAAAAAGACGGTGTCCGGGGGATTTACAGGGGCCTTCCTGCATCACTACATGGTATGGTGATACATAGAGGTCTTTACTTTGGAGGATTTGATACCATAAAAGAGATGTTGTCTGAAGAATCTAAACCCGAGTTGGTATTGTGGAAGCGATGGATGGTTGCTCAAGCAGTTACAACCTCTGCCGGTCTGATATCATATCCGCTAGACACAGTTCGACGGAGGATGATGATGCAGTCTGGCATGGAACATCCGGTGTATAATAGCACCCTCGACTGCTGGAGGAAAATCTATCGGACAGAGGGATTGGTTTCGTTTTACCGTGGCGCAGTTTCGAATGTGTTTAGGAGCACTGGAGCTGCAGCTATCTTAGTCTTGTATGATGAGGTCAAGAAATTTATGAACTGGGGAAGATTGTAA 633 0.4581 DLYKSILRGGNSNADNLFSGASANFIAGAGAGCTSLILVYPLDIAHTRLAADIGRTEVRQFRGIYHFLATIFEKDGVRGIYRGLPASLHGMVIHRGLYFGGFDTIKEMLSEESKPELVLWKRWMVAQAVTTSAGLISYPLDTVRRRMMMQSGMEHPVYNSTLDCWRKIYRTEGLVSFYRGAVSNVFRSTGAAAILVLYDEVKKFMNWGRL 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16457g00001 210 ProSiteProfiles Solute carrier (Solcar) repeat profile. 19 108 IPR018108 -
Trme16457g00001 210 PRINTS Mitochondrial carrier protein signature 126 148 IPR002067 GO:0055085
Trme16457g00001 210 PRINTS Mitochondrial carrier protein signature 34 52 IPR002067 GO:0055085
Trme16457g00001 210 PRINTS Mitochondrial carrier protein signature 81 99 IPR002067 GO:0055085
Trme16457g00001 210 Pfam Mitochondrial carrier protein 119 206 IPR018108 -
Trme16457g00001 210 Pfam Mitochondrial carrier protein 22 111 IPR018108 -
Trme16457g00001 210 ProSiteProfiles Solute carrier (Solcar) repeat profile. 121 204 IPR018108 -
Trme16457g00001 210 PANTHER ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED 1 207 IPR002113 GO:0005471|GO:0005743|GO:0140021|GO:1990544
Trme16457g00001 210 Gene3D Mitochondrial carrier domain 1 207 IPR023395 -
Trme16457g00001 210 SUPERFAMILY Mitochondrial carrier 3 200 IPR023395 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16457g00001 Trme-Chr16457 187 819 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16457g00001 3 203 Antiporters AT5G17400 36.098 3.45e-38 132
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16457g00001 K05863 - gmx:100797251 386.341