Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme164401g00001 ATGGGAAAGGAATCTGATGTATACAGTTATGGGGTGGTTTTGCTTGAGTTGATATCAAGAAAGAAGGCATTAGATTCATCATTTATGGAAGGAATGGATATTGTTTCTTGGGTGAGATCATTGTGGGAGGAAACAGGAGTTGTTGATGAAATTGTTGATTCAGAACTTGCCAATGAAATTTCTAGATATAATTCAAATGTGATGAAGGAAGTAACTAAGGTGCTTTTGGTGGCTTTCAAATGTACAGAAAGGGATCCACGTAGGAGACCTACAATGAGAGAGGTTATCAAGAATTTGTAG 300 0.37 MGKESDVYSYGVVLLELISRKKALDSSFMEGMDIVSWVRSLWEETGVVDEIVDSELANEISRYNSNVMKEVTKVLLVAFKCTERDPRRRPTMREVIKNL 99
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme164401g00001 99 SUPERFAMILY Protein kinase-like (PK-like) 2 98 IPR011009 -
Trme164401g00001 99 ProSiteProfiles Protein kinase domain profile. 1 99 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme164401g00001 99 Pfam Protein tyrosine and serine/threonine kinase 3 99 IPR001245 GO:0004672|GO:0006468
Trme164401g00001 99 Gene3D Transferase(Phosphotransferase) domain 1 1 99 - -
Trme164401g00001 99 PANTHER LEUCINE-RICH REPEAT RECEPTOR PROTEIN KINASE EMS1 4 99 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme164401g00001 Trme-Chr164401 76 375 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme164401g00001 2 99 Receptor kinase-like Gene Family AT1G73080 49.515 8.22e-26 97.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-XI-1 Trme164401g00001 PK_Tyr_Ser-Thr 2e-06 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme164401g00001 - - gmx:100802056 157.918