Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme164156g00001 GGTAAGGCTGCTCATTTGGTCGACAGCACTAACCAAGTTGGTCATTTCCAACAGGTGTTGACAGCAATAGGTAACTTCTGCATTTGCTCAATTGCTTTGGGAATGATCATCGAGATTGTTGTCATGTATCCAATTCAGCGCCGAAAGTATAGAAGTGGAATCGACAATCTCTTGGTGCTTCTCATTGGAGGGATTCCAATTGCCATGCCAACAGTTTTGTCAGTTACCATGGCTATTGGTTCACATAGGTTGTCTGAGCAAGGCGCTATCACAAAGAGGATGACAGCCATTGAAGAAATGGCTGGGATGGATGTTTTATGTAGTGACAAAACTGGAACTTTAACACTTAACAAACTTACTGTAGACAAGAATCTGATTGAGGTATTTTCAAGAGATACCGACAAGGACATG 411 0.4209 GKAAHLVDSTNQVGHFQQVLTAIGNFCICSIALGMIIEIVVMYPIQRRKYRSGIDNLLVLLIGGIPIAMPTVLSVTMAIGSHRLSEQGAITKRMTAIEEMAGMDVLCSDKTGTLTLNKLTVDKNLIEVFSRDTDKDM 137
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme164156g00001 137 Pfam E1-E2 ATPase 1 86 - -
Trme164156g00001 137 ProSitePatterns E1-E2 ATPases phosphorylation site. 109 115 IPR018303 -
Trme164156g00001 137 PANTHER CALCIUM-TRANSPORTING ATPASE 1 136 - -
Trme164156g00001 137 Gene3D - 1 111 - -
Trme164156g00001 137 SUPERFAMILY Calcium ATPase, transmembrane domain M 8 102 IPR023298 -
Trme164156g00001 137 FunFam Phospholipid-transporting ATPase IC 104 116 - -
Trme164156g00001 137 NCBIfam HAD-IC family P-type ATPase 3 126 IPR001757 GO:0005215|GO:0005524|GO:0016020|GO:0016887
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme164156g00001 Trme-Chr164156 12 511 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme164156g00001 1 136 Primary Pumps ATPases AT2G07560 91.176 4.45e-84 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme164156g00001 K01535 - aew:130780353 256.144