Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme163684g00001 ATTACTTGCGTGGATCATTCTCAATATGATGAGAGTGCTGTCCACCAAATCTTTCGTCCAATGGTTAACTCCGGCATCGCATTTGGTGCTCATAGATGGGTTGCAACTCTTCAGAGGCACTGTGAATCCCTTGCTATCCTCATGTCTCCCGTACCATCCGATGAATCTGCAGGTATGCAACTTTGTTATTTCACTTAA 198 0.4444 ITCVDHSQYDESAVHQIFRPMVNSGIAFGAHRWVATLQRHCESLAILMSPVPSDESAGMQLCYFT 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme163684g00001 65 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 53 IPR042160 -
Trme163684g00001 65 ProSiteProfiles START domain profile. 1 46 IPR002913 GO:0008289
Trme163684g00001 65 Pfam START domain 1 43 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme163684g00001 Trme-Chr163684 256 453 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme163684g00001 1 49 Homeobox Transcription Factor Family AT4G00730 57.143 1.70e-18 75.5
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme163684g00001 K09338 - tpra:123904787 100.523