Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme163558g00001 ATGAATCCACCCGGCCAAATGCTTATAGAGATGCTTTGTGAGGATCAAGGTTTCTTTCTTGAAATAGTCGACATAATTCGAGGTTTTGGGCTGAATATTTTGAAAGCAAAGATGGATTTAAGGAAGAATAAGCTATGGGCGCGTTTTATTGTTGAGGCGAATAGACATGTGACAAGGATAGATGTGTTTTGGTCACTTATCAATCTTCTACAACAACCAAACGCTGCCGGAATTGATTCTTCTAATAATCATGGCAATATTATTCCTTCCAACATTGCTTAA 282 0.3759 MNPPGQMLIEMLCEDQGFFLEIVDIIRGFGLNILKAKMDLRKNKLWARFIVEANRHVTRIDVFWSLINLLQQPNAAGIDSSNNHGNIIPSNIA 93
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme163558g00001 93 PANTHER TRANSCRIPTION FACTOR BHLH155-LIKE ISOFORM X1-RELATED 1 84 IPR043561 GO:0003700|GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme163558g00001 Trme-Chr163558 31 484 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme163558g00001 1 80 Basic Helix-Loop-Helix Transcription Factor Gene Family AT2G27230 52.500 3.59e-24 92.8
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme163558g00001 - - vvo:131617309 170.244