Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Trme163554g00001 | ATGAGCGGTGAGGATGAAGACCCAGANGAAAAAGGGTTGAATTTGAAGCGAAATTCTTCTCGGTTCAATAATTTCCAACGCGATCTTATGGCTGGTGCTGTTATGGGTGGTGCTGTTCATACAATTGTGGCTCCAATTGAGAGAGCTAAGCTATTGTTGCAGACCCAAGAAAGTAATTTGGCTATTGTTGCTAGTGGTCGTCGAAAATTCAAAGGAATGTTTGATTGTATAATTCGTACTGTTAGGGAAGAAG | 253 | 0.4111 | MSGEDEDPXEKGLNLKRNSSRFNNFQRDLMAGAVMGGAVHTIVAPIERAKLLLQTQESNLAIVASGRRKFKGMFDCIIRTVREE | 84 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Trme163554g00001 | 84 | ProSiteProfiles | Solute carrier (Solcar) repeat profile. | 23 | 84 | IPR018108 | - | |
| Trme163554g00001 | 84 | SUPERFAMILY | Mitochondrial carrier | 22 | 84 | IPR023395 | - | |
| Trme163554g00001 | 84 | PANTHER | ADP,ATP CARRIER PROTEIN 1-RELATED-RELATED | 20 | 84 | IPR002113 | GO:0005471|GO:0005743|GO:0140021|GO:1990544 | |
| Trme163554g00001 | 84 | Gene3D | Mitochondrial carrier domain | 21 | 84 | IPR023395 | - | |
| Trme163554g00001 | 84 | PRINTS | Mitochondrial carrier protein signature | 41 | 55 | IPR002067 | GO:0055085 | |
| Trme163554g00001 | 84 | PRINTS | Mitochondrial carrier protein signature | 28 | 41 | IPR002067 | GO:0055085 | |
| Trme163554g00001 | 84 | Pfam | Mitochondrial carrier protein | 24 | 84 | IPR018108 | - |
Functional genes information
| Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
|---|---|---|---|---|---|---|---|---|
| Trme163554g00001 | 6 | 84 | Antiporters | AT5G13490 | 39.506 | 9.27e-11 | 54.3 |