Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1633g00001 ATGATGGCAAACCAGAAACATGATGTCTTGTATGATGTTTTCCTAAGTTTCAAAGGTGAGGGTGGAACTCGCGATGGATTTACCAAGCTTCTCTATGATGCACTTCACCAAAAGGGAATCTTCACTTTCAAAGATGATCAGGAACTTAAAATTGGAGCTGAAATAAGAGCTTCACTTTATAAAGCTATAGAAAATTCAAGAATTTTGATGGTTGTTTTGTGTCAGAACTATGCATCTTCAACTTGGTGTCTTGAGGAACTTACCTACATCATCGATTGTTACCGTAATAATCAGAAATTACCGAAACAGGTTTTGATTATATTTTATGAAGTGGAACCTTCTGATGTTTGGGATGTGAAGAATTCCTTTGAAGATGCCATGATTCAACATGAAAAAAGATTCGGCAGAGACTCTGAGAAGGTTACAGCTTGGAGGAACGCTTTGTCCTCCGTTCGTGACCTAAGAAGTCAACATTGCAACTACCAAACGAATGAACTTGAGCTTGTCCAAAAGATTGCTGAAGATACGTCTTCTAAACTACCTTTGCCTGTACAAGTGAAACACATAGTTGGACTTGATTCTCGTTTTGAATTGGTGAAACCACTTCTGAATTTTGAATCTCGGAAAGCCGTTTTAATCTTGGAAATTTATGGAGAGGGTGGAATAGGCAAAACCACATTTGCCTTGGATATCTATAACAAGATCAAGCATCAATTTGAAGCTGCAAGTTTTCTTGCTAATGTTGGAGAAAAATCAAACATAGAAAATCTCCAAAAGACACTTCTGTCTGATATGGGTGAGAAAATTACAGAAAGTGCATTTGAAGGAGGATTCGAAATTGAGCGCAGGCTTTACAATAAAAAAGTTCTTCTAGTTCTGGATAACCTTGATTCAATATTTCAATTAGAAGCTCTAGCCGGAAGATGTGATTGGTTTGGTTATGGTAGCAGGATTATCATAACAACAAGGGACAAATCATTGGTAGATTATAAGTGTTTAATCGATGATTTTATCATTGAAAAATATAAAATGGAAGAGATGAATGTTCAAGAATCTCTGGAACTCTTTTGTTGGCATGCCTTCGATATGATTAATCCTGCAAAAAACTTCAAAGTTCTTTCTATTCTTGCCGTGAGTTATGCAAAGGGTGTTCCTTTGGTTTTGGAACTACTAGGCTTCATTTTGAAGGGGGAGAAATGGGAGTACGTTAAAAGGATACTAAATACTGATTTCATCCCAGATATTCGAGCATTAGTTATGAAATGTTTCATAAATATTGATGAAAATGGCTGCTTGGATATGCATGATATAATACAAGACATGGCCAAACAGGTTATCATAAACGAGTCTCCAAAAAATCCTGATGAACGTAGTAGATTATGGGATCATAAGGAAGTTCTTGAAGTACTCAAAGAAAACTCGATAAGCAGTAAAATCCAAGGAATAATACTAGACCCCCCTTCTCATGAACGTGTGCATTATTCTGATCTTTTCGAGAATATGAGGAACCTTAGAATTCTAATTGTTCGGAATACAACATTTTCATCAGCTCCTCGTTGTTTACCAAATAGTTTACAATTGCTTGATTGGAAAGGGTACCCATCAAAATCTTTTCCTTATGAATTTCAACCCCATAAAATTGTTGAATTCAATTTACCTCACAGTTCTCTGAGATTGAAAAAGCCATTTAAGATATATCAAGATTTGACATCCATTAACCTCTCTGAGTGTCAATCCATTACTCAAATACCTGATGTGTCTGGATCCATAAATTTAAGAGTATTGACAATTGACAGATGCCGTAAATTGGTAAGGTTTCCTAAATCCATTGGATTTATGCCAAAACTTGTGTGTTTAAGTGCTTCAGAGTGTACCGTGCTAGAAAGTTTTGTCCCAAATATTTACTTGCCATCTCTTGAGGTTCTCTCCTTTAATTTGTGCAAAAGATTTGAACACTTCCCCGATGTAACGGACACGATGGATAAGCCATTAAGGATTAGCATGATAG 2008 0.3616 MMANQKHDVLYDVFLSFKGEGGTRDGFTKLLYDALHQKGIFTFKDDQELKIGAEIRASLYKAIENSRILMVVLCQNYASSTWCLEELTYIIDCYRNNQKLPKQVLIIFYEVEPSDVWDVKNSFEDAMIQHEKRFGRDSEKVTAWRNALSSVRDLRSQHCNYQTNELELVQKIAEDTSSKLPLPVQVKHIVGLDSRFELVKPLLNFESRKAVLILEIYGEGGIGKTTFALDIYNKIKHQFEAASFLANVGEKSNIENLQKTLLSDMGEKITESAFEGGFEIERRLYNKKVLLVLDNLDSIFQLEALAGRCDWFGYGSRIIITTRDKSLVDYKCLIDDFIIEKYKMEEMNVQESLELFCWHAFDMINPAKNFKVLSILAVSYAKGVPLVLELLGFILKGEKWEYVKRILNTDFIPDIRALVMKCFINIDENGCLDMHDIIQDMAKQVIINESPKNPDERSRLWDHKEVLEVLKENSISSKIQGIILDPPSHERVHYSDLFENMRNLRILIVRNTTFSSAPRCLPNSLQLLDWKGYPSKSFPYEFQPHKIVEFNLPHSSLRLKKPFKIYQDLTSINLSECQSITQIPDVSGSINLRVLTIDRCRKLVRFPKSIGFMPKLVCLSASECTVLESFVPNIYLPSLEVLSFNLCKRFEHFPDVTDTMDKPLRISMI 669
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1633g00001 669 SUPERFAMILY L domain-like 498 656 - -
Trme1633g00001 669 Gene3D - 347 422 IPR042197 -
Trme1633g00001 669 SMART till_3 10 154 IPR000157 GO:0007165
Trme1633g00001 669 SUPERFAMILY Toll/Interleukin receptor TIR domain 6 154 IPR035897 -
Trme1633g00001 669 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 180 409 IPR027417 -
Trme1633g00001 669 Gene3D Ribonuclease Inhibitor 470 665 IPR032675 -
Trme1633g00001 669 ProSiteProfiles TIR domain profile. 9 180 IPR000157 GO:0007165
Trme1633g00001 669 Gene3D - 8 176 IPR035897 -
Trme1633g00001 669 Pfam NB-ARC domain 207 411 IPR002182 GO:0043531
Trme1633g00001 669 PRINTS Disease resistance protein signature 213 228 - -
Trme1633g00001 669 PRINTS Disease resistance protein signature 564 580 - -
Trme1633g00001 669 PRINTS Disease resistance protein signature 283 297 - -
Trme1633g00001 669 PRINTS Disease resistance protein signature 381 395 - -
Trme1633g00001 669 Pfam TIR domain 11 180 IPR000157 GO:0007165
Trme1633g00001 669 Gene3D - 177 333 IPR027417 -
Trme1633g00001 669 PANTHER LEUCINE-RICH REPEAT-CONTAINING PROTEIN 11 655 IPR044974 GO:0006952
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1633g00001 Trme-Chr1633 192 2909 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1633g00001 11 657 WRKY Transcription Factor Family AT4G12020 25.417 5.58e-51 189
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1633g00001 - - tpra:123920924 884.404