Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16326g00001 ATGGAAAAGGGTGTTTTTGTTTCATGCTCAGCTGGAAATTCAGGACCTGACCCTGTCAGCCTAACAAATGTGTCACCATGGATCACCACAGTTGGAGCTAGTACAATGGACAGAGATTTTCCTGCAGATGTTAGCCTTGGAAATGGAAGAAAAATAACAGGAACATCACTCTATAAAGGAAAAACCATGCTCTCAGTTAGAAAACAATACCCTTTGGTATACATGGGAGGTAACTCAAGTAGTCCTGATCCAAGATCTTTGTGCTTGGAAGGTACTTTAGATCNTNNNNNNNNNNCCGGAAAGATTGTGATTTGTGATAGAGGAATTAGTCCTAGAGTGCAAAAGGGTCAGGTAGTGAAAAATGCAGGAGGAGTAGGAATGATTCTCACAAACACTGCAGCAAATGGTGAAGAACTTGTAGCAGATTGTCACCTACTTCCAGCAGTAGCAATAGGAGAAAAAGAAGGCAAAGAAATCAAACAATATGTGTTAACAAATAAAAAAGCATCTGCAACATTAGCTTTTCTAAACACAAGATTAGGAATTAAACCATCACCTATAGTAGCTGCATTTTCATCAAGAGGGCCTAATTTTCTAACACTTGAAATTCTTAAACCTGATATAGTAGCTCCTGGTGTGAACATTCTTGCTGCTTGGAGTGGAGTTACTGGTCCATCAAGTTTATCAACAGATCATAGAAGAGTGAAATTTAATATACTTTCCGGAACTTCGATGTCATGTCCTCATGTAAGTGGAATCGCCGCTGTGATCAAAGCTAAACATCCTGATTGGAGTCCGGCCGCTATAAAATCAGCAATCATGACAACAGCTTATGTTCATGATAATACTATTAAGCCTCTTAGAGATGCTTCTTCTGCTGAATTTTCAACTCCTTATGATCATGGTGCTGGTCACATTAATCCTAGAAAAGCTCTTGATCCTGGTTTAGTTTATGATATTGCACCTCAAGAATATTTTGAGTTTCTTTGCACACAGAAACTAAGTCCTTCAGAATTAGGAGTGTTTGCCAAAAATTCAAACAGAATTTGCAAACACACTCTTGCTAGTGTTG 1072 0.3834 MEKGVFVSCSAGNSGPDPVSLTNVSPWITTVGASTMDRDFPADVSLGNGRKITGTSLYKGKTMLSVRKQYPLVYMGGNSSSPDPRSLCLEGTLDXXXXXGKIVICDRGISPRVQKGQVVKNAGGVGMILTNTAANGEELVADCHLLPAVAIGEKEGKEIKQYVLTNKKASATLAFLNTRLGIKPSPIVAAFSSRGPNFLTLEILKPDIVAPGVNILAAWSGVTGPSSLSTDHRRVKFNILSGTSMSCPHVSGIAAVIKAKHPDWSPAAIKSAIMTTAYVHDNTIKPLRDASSAEFSTPYDHGAGHINPRKALDPGLVYDIAPQEYFEFLCTQKLSPSELGVFAKNSNRICKHTLASV 357
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16326g00001 357 CDD PA_subtilisin_like 43 173 - -
Trme16326g00001 357 Gene3D - 37 181 - -
Trme16326g00001 357 Gene3D Peptidase S8/S53 domain 1 325 IPR036852 GO:0004252|GO:0006508
Trme16326g00001 357 ProSitePatterns Serine proteases, subtilase family, serine active site. 242 252 IPR023828 -
Trme16326g00001 357 Pfam Subtilase family 2 282 IPR000209 GO:0006508|GO:0008236
Trme16326g00001 357 FunFam subtilisin-like protease SBT1.5 37 180 - -
Trme16326g00001 357 Pfam PA domain 69 159 IPR003137 -
Trme16326g00001 357 ProSiteProfiles Serine proteases, subtilase domain profile. 1 312 - -
Trme16326g00001 357 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 1 343 IPR045051 -
Trme16326g00001 357 SUPERFAMILY Subtilisin-like 2 316 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16326g00001 Trme-Chr16326 317 1388 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16326g00001 1 355 Subtilisin-like Serine Gene Family AT5G51750 77.183 0.0 584
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16326g00001 - - psat:127098601 663.299