Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16316g00001 ATGACAAGTAAATTTTTTATCTGCACCATCGTTCCTCTTTTTATTGCTCTTTACCTGCCTGGAAGGCCTCCTAAAACAGACAAGGCGGCAATTCTGATTGATGCTGCCCGCATGGTGACACAGTTGCGGGGTGAAGCCGAGAAGTTGAGAAACTCAAATTCAAATCTTCAAGAGAAGATTAAAGAGTTGAAGGTTGAGAAAAATGAACTCCGTGATGAGAAGCAGAGGCTTAAGGCTGAGAAAGAGAAGTTGGAGCAGCAGATGAAATCAATGAATGCCCAACCAAGTTTCTTGACACACCCTCCTGCAATCCCTGCTGCATTTGCTCCACAAGGCCAAGTCCCTGGCAACAAGTTAATGCCTTTCATGAGTTATCCAGGAGTTGCTATGTGGCAATTCATGCCACCAGCCTCCGTGGACACCTCACANNNNNNTNNNNNNNNNNCACCAGTCGCCTAA 459 0.4444 MTSKFFICTIVPLFIALYLPGRPPKTDKAAILIDAARMVTQLRGEAEKLRNSNSNLQEKIKELKVEKNELRDEKQRLKAEKEKLEQQMKSMNAQPSFLTHPPAIPAAFAPQGQVPGNKLMPFMSYPGVAMWQFMPPASVDTSXXXXXXXPVA 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16316g00001 152 MobiDBLite consensus disorder prediction 73 110 - -
Trme16316g00001 152 Gene3D - 32 94 - -
Trme16316g00001 152 PANTHER BHLH TRANSCRIPTION FACTOR 20 152 IPR044818 GO:0003700|GO:0006355|GO:0006879|GO:0046983
Trme16316g00001 152 SUPERFAMILY Prefoldin 9 93 - -
Trme16316g00001 152 Coils Coil 39 94 - -
Trme16316g00001 152 MobiDBLite consensus disorder prediction 73 87 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16316g00001 Trme-Chr16316 506 1228 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16316g00001 16 152 Basic Helix-Loop-Helix Transcription Factor Gene Family AT5G54680 74.101 9.58e-68 203
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16316g00001 - - jre:108993453 221.09