Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme163091g00001 ATGGGATTAGGAAGAAAAATAGACCCAGAGCCAGGAAGATGTAGAAGAACAGATGGAAAGAAATGGAGGTGTTCAAAAGAAGCATATCCAGATTCAAAGTACTGTGAGAGGCACATGCATAGAGGGAAAAACCGTTCAAGAAAGCCTGTGGAANNNNNNTNNNNNNNNNNTNNNNNNNNNNTNNNNNNNNNNGCTGCTACTTCATCAATCTTATCAATGACTAAAAATAGTAGTTTTGATCCTGATAATAATACTGCAGCACTAAACCCAACAACTCATGACAGTACTTACCATTACCCTCAACACTCTTCTTATGCTTCTTCCCATCTTAACCACTCTTTCCTCTACCATAACCCTCCATCTTCAAGGCCTAATTTCTCATTTCAAGAGAACACTAGTGCTGCTCCCATGTTTCTTGACAGTACTGGTTCTTCCTCTCACAATAACAACAACAACA 457 0.3654 MGLGRKIDPEPGRCRRTDGKKWRCSKEAYPDSKYCERHMHRGKNRSRKPVEXXXXXXXXXXXXXAATSSILSMTKNSSFDPDNNTAALNPTTHDSTYHYPQHSSYASSHLNHSFLYHNPPSSRPNFSFQENTSAAPMFLDSTGSSSHNNNNN 152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme163091g00001 152 MobiDBLite consensus disorder prediction 67 152 - -
Trme163091g00001 152 Pfam WRC 9 51 IPR014977 -
Trme163091g00001 152 PANTHER GROWTH-REGULATING FACTOR 5 3 137 IPR031137 GO:0005634|GO:0006351|GO:0032502
Trme163091g00001 152 ProSiteProfiles WRC domain profile. 8 52 IPR014977 -
Trme163091g00001 152 MobiDBLite consensus disorder prediction 66 152 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme163091g00001 Trme-Chr163091 1 457 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme163091g00001 1 49 GRF Transcription Factor Family AT2G06200 92.157 1.11e-28 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme163091g00001 - - cam:101508073 185.267