Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme162680g00001 ATGTTGGCGCAAAGTTGGAATCCAAGTAAGTATTTGTTTGTGAGGTGTGACAATGAGCCAGCTCCATGGACAAGTGATTTRTCTGGAGAYCGTCCCCGTCCACTACCTACAATCAAGGAGTTTAAGGGTGCAGTTGATATTACCGAAAGGAAGGGTGACCCTTCATGGGACTTTGAT 177 0.452 MLAQSWNPSKYLFVRCDNEPAPWTSDLSGDRPRPLPTIKEFKGAVDITERKGDPSWDFD 59
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme162680g00001 59 PANTHER E3 UBIQUITIN-PROTEIN LIGASE UHRF-RELATED 10 59 IPR045134 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme162680g00001 Trme-Chr162680 84 481 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme162680g00001 5 59 C2H2 Transcription Factor Family AT5G39550 65.455 1.71e-20 80.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme162680g00001 K10638 - gmx:100786796 100.138