Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme162635g00001 ATGCCTTCTTCAACTCTTCAATGGCTAAGCCTAGTTGGTATCATTTGGCTCCAAGCTATAAATGGAACAAACTCAAACTTCCCTGCTTACTCTTCCCAACTAAAACAGCTTCTTTCCATTTCTCAAATTCAGCTCAATAACCTCGCTTTTGCATCTGATGCCGGCAAACTTTTTGGTTGGTTTTCCGGCCTTGCAGCTATTTACCTTCCCCTCTGGCTCGTCCTCACCATCGGTTCGTTTCTCGGACTAATCGGTTATGCATTTGTTGGATCAACACCGTTTGTTATGTCGTTGCCATACGAAACTTTCTATCCGATAGCCAAGTTGCCGTTGGATTAA 339 0.4366 MPSSTLQWLSLVGIIWLQAINGTNSNFPAYSSQLKQLLSISQIQLNNLAFASDAGKLFGWFSGLAAIYLPLWLVLTIGSFLGLIGYAFVGSTPFVMSLPYETFYPIAKLPLD 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme162635g00001 112 Pfam Nodulin-like 7 88 IPR010658 -
Trme162635g00001 112 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 8 88 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme162635g00001 Trme-Chr162635 23 446 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme162635g00001 1 100 Nodulin-like Gene Family AT4G19450 53.922 1.33e-27 102
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme162635g00001 - - gmx:100793370 147.517