Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme1624g00001 ACTGTGAGGTTTAATCTTGATCCATTTACTGAACACAATGATGCTGACCTCTGGGAGGCTCTGGARAGGGCACATTTGAAGGATGTGATACGGAGGAATTCTTTGGGGCTGGATGCTGAGGTATCTGAGGCGGGCGAGAACTTCAGTGTTGGACAGAGGCAACTGTTGAGTCTTGCCAGGGCTTTGTTGCGGAGATCGAAGATTTTAGTACTTGATGAGGCAACTGCAGCGGTTGATGTTAGAACAGATGCACTCATACAGAAAACAATCAGGGAGGAATTTAAATCCTGTACAATGCTCATTATTGCTCATCGCCTCAACACTATTATTGATTGTGATCGGGTTCTTTTGCTTGATGGAGGCAAGGTTCTTGAATATGATACCCCCGAGGAGCTCTTGTCAAATGAGGGTAGTGCTTTCTCTAAGATGGTGCAAAGTACAGGAGCTGCAAATGCCCAATACTTACGCAGCTTAGTACACGGTGGGGACAAGACAGAAAGAGAAGAGAACAAGAATCTGGATGGTCAGAGAAAATGGCTAGCTTCTTCTCGGTGGGCTGCTGCAGCCCAGTTTGCTCTTGCTGTGAGTCTCACTTCGTCACAGAATGACCTACAACGTTTGGAAGTAGAAGATGAGAATAGTATTCTCAAGAAGACAAAGGATGCTCTCATAACTTTGCAGGGTGTTTTGGAAAGGAAGCATGATAAAGAAATTGAGGAATCTTTAAACCAACGCCAAATATCCTCTGAGGGATGGTGGACATCGCTTTACAAGATG 777 0.4492 TVRFNLDPFTEHNDADLWEALERAHLKDVIRRNSLGLDAEVSEAGENFSVGQRQLLSLARALLRRSKILVLDEATAAVDVRTDALIQKTIREEFKSCTMLIIAHRLNTIIDCDRVLLLDGGKVLEYDTPEELLSNEGSAFSKMVQSTGAANAQYLRSLVHGGDKTEREENKNLDGQRKWLASSRWAAAAQFALAVSLTSSQNDLQRLEVEDENSILKKTKDALITLQGVLERKHDKEIEESLNQRQISSEGWWTSLYKM 259
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme1624g00001 259 FunFam AGAP012735-PA 27 149 - -
Trme1624g00001 259 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 1 143 IPR027417 -
Trme1624g00001 259 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 1 151 - -
Trme1624g00001 259 Gene3D - 1 148 IPR027417 -
Trme1624g00001 259 Pfam ABC transporter 14 76 IPR003439 GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme1624g00001 Trme-Chr1624 193 2988 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme1624g00001 14 151 Calmodulin-binding Proteins AT2G36910 38.732 9.84e-19 84.0
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme1624g00001 - - gmx:100795004 447.203