Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16238g00001 CTTGGTGCTATTCCAAAAAAGTGGAAAGGAGATTGTGCAGGCGGACGTAACTTCAGTTGCAACAAGAAGATCATTGGAGCACGATTTTACGGTTTTAATGATGAGAGTGCAAGAGACTCAGATGGTCATGGAACTCACACATCGTCAACAACAGGTGGAAGGGAGGTGAAGGGTGTGAGCTTTAATGATCTTTCAAATGGCACTGCAAGAGGTGGAGTCCCATATTCAAGGATTGCTGCATACAAAGTATGCAACGATCAAGGTATGTGCACTGGTCAAGCTATTTTATCTGCATTTGATGATGCCATTGCAGATGGAGTTGATGTCATTACCATATCTATGGGTAGACCAGGAATCATTGATTTTTTGGATGAACCTATTTCCATCG 388 0.4253 LGAIPKKWKGDCAGGRNFSCNKKIIGARFYGFNDESARDSDGHGTHTSSTTGGREVKGVSFNDLSNGTARGGVPYSRIAAYKVCNDQGMCTGQAILSAFDDAIADGVDVITISMGRPGIIDFLDEPISI 129
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16238g00001 129 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 2 129 IPR045051 -
Trme16238g00001 129 MobiDBLite consensus disorder prediction 36 59 - -
Trme16238g00001 129 ProSiteProfiles Serine proteases, subtilase domain profile. 1 129 - -
Trme16238g00001 129 MobiDBLite consensus disorder prediction 43 59 - -
Trme16238g00001 129 Gene3D Peptidase S8/S53 domain 2 128 IPR036852 GO:0004252|GO:0006508
Trme16238g00001 129 Pfam Subtilase family 33 116 IPR000209 GO:0006508|GO:0008236
Trme16238g00001 129 SUPERFAMILY Subtilisin-like 16 121 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16238g00001 Trme-Chr16238 14 401 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16238g00001 1 129 Subtilisin-like Serine Gene Family AT4G15040 62.791 7.35e-47 158
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16238g00001 - - mtr:11442885 177.948