Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme162139g00001 GCCAGTAAAGGTTGGTTGAATCCACCTCTTCATTTCAGTGATGAACCATGTCGTCACAAGATTCTAGATCTTATTGGTGATCTCTCGCTGTTTGCTCAGTTTGGTAATCAAGGACTCCCAGTGGCACACATCGTAGCTTACAAGGGTGGTCATGCATTGCATGTTGATTTGGCTCGCCAACTGATGGGAATAACATGA 198 0.4495 ASKGWLNPPLHFSDEPCRHKILDLIGDLSLFAQFGNQGLPVAHIVAYKGGHALHVDLARQLMGIT 65
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme162139g00001 65 Gene3D lpxc deacetylase, domain 2 1 64 IPR011334 GO:0008759|GO:0009245
Trme162139g00001 65 Pfam UDP-3-O-acyl N-acetylglycosamine deacetylase 3 62 IPR004463 GO:0008759|GO:0009245
Trme162139g00001 65 SUPERFAMILY Ribosomal protein S5 domain 2-like 3 62 IPR020568 -
Trme162139g00001 65 PANTHER UDP-3-O-ACYL-N-ACETYLGLUCOSAMINE DEACETYLASE 1, MITOCHONDRIAL-RELATED 2 63 IPR004463 GO:0008759|GO:0009245
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme162139g00001 1 61 Carbohydrate Esterase AT1G25054 77.049 1.57e-30 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme162139g00001 K02535 - gmx:100814465 131.724