Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme162051g00001 ATGGAAGTAGTAGCAGCAGCAATCACAAAAAACAACGGCAATATTGATTCATTCTGTTTGAATCATGCTAATGCTAATAACATGAAAGTGAATGGTGCTGATCCTTTGAATTGGGGTGTGGCGGCTGAGGCAATGAARGGGAGTCACTTGGATGAGGTGAAGCGTATGGTGGAGGAGTACCGGAAGCCGGTTGTCCGTCTTGGTGGCGAGACACTGACGATTTCTCAGGTGGCTGCCATTGCTGCACACGATGGTGCCACAGTGGAGCTGTCGGAATCTGCTAGAGCCGGCGTTAAGGCAAGCAGTGACTGGGTTATGGAGAGTATGAACAAAGGTACCGACAGTTACGGTGTCACCACAGGATTCGGCGCT 372 0.5 MEVVAAAITKNNGNIDSFCLNHANANNMKVNGADPLNWGVAAEAMKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIAAHDGATVELSESARAGVKASSDWVMESMNKGTDSYGVTTGFGA 124
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme162051g00001 124 Gene3D - 24 124 IPR024083 -
Trme162051g00001 124 SUPERFAMILY L-aspartase-like 34 124 IPR008948 GO:0003824
Trme162051g00001 124 PANTHER HISTIDINE AMMONIA-LYASE 28 124 IPR001106 -
Trme162051g00001 124 Pfam Aromatic amino acid lyase 72 124 IPR001106 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme162051g00001 Trme-Chr162051 146 517 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme162051g00001 11 124 Monolignol Biosynthesis Gene Families AT2G37040 71.552 8.96e-49 163
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme162051g00001 K10775 - csav:115709282 171.785