Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme161770g00001 ATGAAAGTGAATGGTGCTGATCCTTTGAATTGGGGTGTGGCAGCTGAGGCAATGAAGGGGAGTCACTTGGATGAGGTGAAGCGTATGGTGGAGGAGTACCGGAAACCGGTGGTCCGTCTTGGTGGTGAGACGCTAACGATTTCTCAGGTGGCTGCCATTGCTGCACACGATGGTGCGACGGTGGAGCTTTCGGAATCTGCTAGAGCCGGTGTTAAGGC 218 0.5459 MKVNGADPLNWGVAAEAMKGSHLDEVKRMVEEYRKPVVRLGGETLTISQVAAIAAHDGATVELSESARAGVKA 73
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme161770g00001 73 Gene3D - 1 73 IPR024083 -
Trme161770g00001 73 PANTHER HISTIDINE AMMONIA-LYASE 3 73 IPR001106 -
Trme161770g00001 73 SUPERFAMILY L-aspartase-like 7 72 IPR008948 GO:0003824
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme161770g00001 Trme-Chr161770 1 218 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme161770g00001 1 73 Monolignol Biosynthesis Gene Families AT2G37040 72.973 1.11e-29 107
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme161770g00001 K10775 - gmx:100811101 120.938