Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16173g00001 ATGTGTGATGTACTGTCTGGAACAACTTCATCTGGAAGTCATCATTTCGGTGTACTTGAAGGATGGTTCGGCGAACACTGGTCGACTGGGCGGACTTTTGTTCTTCTCGTGACAACCCTTTTGGTATTTACTCCATTAGGATTCTTTAAGAGAATAGATTCATTAAGATATACTTCTGGTTTAGCAGTGGCTTTGGCAATTGTTTTTCTTGTCATAACTGCTGGAATCACATTTGTTAAATTGTTCAATGGAAGTATAGAGAGTCCAAGATTGCTTCCTAATATTACTGATATCACATCTATTTGGAATCTATTCACCGCAGTTCCGGTTCTTGTCACGGCATTTGTTTGTCATTACAATG 361 0.3878 MCDVLSGTTSSGSHHFGVLEGWFGEHWSTGRTFVLLVTTLLVFTPLGFFKRIDSLRYTSGLAVALAIVFLVITAGITFVKLFNGSIESPRLLPNITDITSIWNLFTAVPVLVTAFVCHYN 120
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16173g00001 120 PANTHER AMINO ACID TRANSPORTER 3 120 - -
Trme16173g00001 120 Pfam Transmembrane amino acid transporter protein 17 120 IPR013057 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16173g00001 Trme-Chr16173 132 689 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16173g00001 3 120 Amino Acid or Auxin Permease AAAP Family AT3G30390 68.644 6.21e-55 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16173g00001 K14207 - gmx:100778699 196.052