Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme161586g00001 ACAGAAATGGCTCAGTTAGTTTGTGGAGGATGCCATACTTTACTCATGTACATCCGCGGAGCGACAAGCGTTCAATGCTCTTGTTGTCACACAGTCAATCTAGCTTTGGAAGGATGCTACTTATGTACCAATATGGAGCAAGATCCGTGA 150 0.4467 TEMAQLVCGGCHTLLMYIRGATSVQCSCCHTVNLALEGCYLCTNMEQDP 49
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme161586g00001 49 PANTHER PROTEIN LSD1 1 38 IPR040319 -
Trme161586g00001 49 NCBIfam zinc finger domain, LSD1 subclass 5 34 IPR005735 -
Trme161586g00001 49 Pfam LSD1 zinc finger 8 32 IPR005735 -
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2C2-LSD Trme161586g00001 zf-LSD1 1.8e-13 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme161586g00001 - - lper:127322611 84.3445