Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme161352g00001 ATGAAATTGAAGATGAAGAACATTGAATGGTGGATGAACAAAAGACGCTTGCCACAAGGGCTCCGACAACGTGTTCGTAACTATGAGAGACAATGTTGGGCTGCGATGCGCGGGGTTGATGAATGCCAATTGATCAAAAACCTCCCCGAGGGTTTGAGAAGGGACATCAAGTA 173 0.4624 MKLKMKNIEWWMNKRRLPQGLRQRVRNYERQCWAAMRGVDECQLIKNLPEGLRRDIK 57
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme161352g00001 57 SUPERFAMILY cAMP-binding domain-like 2 56 IPR018490 -
Trme161352g00001 57 Gene3D Helix hairpin bin 1 57 - -
Trme161352g00001 57 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 1 57 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme161352g00001 Trme-Chr161352 1 173 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme161352g00001 1 57 Ion Channels AT5G54250 80.702 1.25e-28 103
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme161352g00001 K05391 - vvo:131648017 115.546