Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme161237g00001 AAAAAACGTGCTGTCGACGACAACAACGCGAATGGAAACGCTTCAAAACGTTCCAAAGGCAAAGAAACTGTTTCTGCCGCTGCTGGTGGTTCTGGTGAAGAGAATGATGACATGGAGGAAGACGTGAGATTGACTGGTGATGACTCAAAGAAAACTTTTAGAAGAATCTTCAGTGAAGAAGATGAACTTGTTATTCTAAAAGGTCTCATTGATTTTATTTCCAAAACCGGAAAGGATCCTTTGAAGAATATAGCTGCTTTTCACGATTTTGTGAAGAAATCGCTTCATGCTACGGCGAGCAACCAGCAAATTAAGCGGAAAATTCGTGGGTTAAAGGATAAATTTGAATCAAGTGATAGTTTCAATAAATCTCACGACAAGGAAGCTTTTGAACTCTTCAAGAAGATTAGCTGGGGAAACAATGGTGGGAATGTAGCTGGAGAAGAAAATGGAAAAGCTGTTAATGTGAAAAGTCCAAAGAAAGATGTTAATGTTAAAGTTAAGCACATTGGTTCTTCT 519 0.3854 KKRAVDDNNANGNASKRSKGKETVSAAAGGSGEENDDMEEDVRLTGDDSKKTFRRIFSEEDELVILKGLIDFISKTGKDPLKNIAAFHDFVKKSLHATASNQQIKRKIRGLKDKFESSDSFNKSHDKEAFELFKKISWGNNGGNVAGEENGKAVNVKSPKKDVNVKVKHIGSS 173
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme161237g00001 173 MobiDBLite consensus disorder prediction 1 45 - -
Trme161237g00001 173 MobiDBLite consensus disorder prediction 138 158 - -
Trme161237g00001 173 PANTHER BNAANNG10740D PROTEIN-RELATED 26 167 IPR007592 GO:0006355
Trme161237g00001 173 Pfam Protein of unknown function, DUF573 53 136 IPR007592 GO:0006355
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme161237g00001 Trme-Chr161237 1 519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme161237g00001 53 142 GeBP Transcription Factor Family AT1G61730 47.368 2.20e-21 87.4
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF GeBP Trme161237g00001 DUF573 1.4e-21 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme161237g00001 - - tpra:123884067 223.402