Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16106g00001 ATGGTTATAGTCCCAGCTACAACTGGCCAGATGGGTGTTCTCCCAGGACATGTCCCAACAATTGCTGAGTTGAAACCTGGGGTCCTGTCTGTACACGAAGGGAATGATACAACCAAGTATTTTGTAAGCAGTGGCTTTGTCTTCATTCATGCAAACTCTGTTGCTGATATAATCGCTGTTGAGGCTGTCCCAGTGGATCAAATTGATGCAAGCCAAGTGCAGAAGGGTCTTCAAGAGTTCACTCAGAAGCTCAACTCAGCATCAACTGACTTGGAGAAAGCTGAAGCTCAGATTGGAGTTGATGTGCATAGCGCTCTCAACTCAGCTCTTACAGGCTAA 339 0.4631 MVIVPATTGQMGVLPGHVPTIAELKPGVLSVHEGNDTTKYFVSSGFVFIHANSVADIIAVEAVPVDQIDASQVQKGLQEFTQKLNSASTDLEKAEAQIGVDVHSALNSALTG 112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16106g00001 112 Coils Coil 77 97 - -
Trme16106g00001 112 FunFam ATP synthase subunit delta 69 111 - -
Trme16106g00001 112 PANTHER ATP SYNTHASE DELTA/EPSILON CHAIN 1 112 IPR001469 GO:0015986|GO:0045261|GO:0046933
Trme16106g00001 112 Gene3D - 1 68 IPR036771 -
Trme16106g00001 112 CDD F1-ATPase_delta 1 105 IPR001469 GO:0015986|GO:0045261|GO:0046933
Trme16106g00001 112 Pfam ATP synthase, Delta/Epsilon chain, beta-sandwich domain 1 54 IPR020546 GO:0015986
Trme16106g00001 112 NCBIfam ATP synthase F1 subunit epsilon 1 98 IPR001469 GO:0015986|GO:0045261|GO:0046933
Trme16106g00001 112 SUPERFAMILY Epsilon subunit of F1F0-ATP synthase N-terminal domain 1 63 IPR036771 -
Trme16106g00001 112 Gene3D - 69 111 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16106g00001 1 112 Primary Pumps ATPases AT5G47030 81.250 2.34e-65 194
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16106g00001 K02134 - gmx:100780778 204.527