Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme160998g00001 TACATGGGAACAATAACTGGCATCAGTGACCTGGATTCTGTCCGGTGGCCAAATTCACATTGGCGTTCTGTAAAGGTTGGCTGGGACGAATCCACTGCAGGTGAGAGGCAACCTAGAGTGTCTCTATGGGAAATTGAGCCACTAACAACATTTCCGATGTATCCATCTCCATTCCCACTTAGGCTTAAAAGACCATGGCCTCCAGGATTGCCTGCATTCCATG 223 0.4843 YMGTITGISDLDSVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSPFPLRLKRPWPPGLPAFH 74
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme160998g00001 74 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 1 71 IPR044835 GO:0003677|GO:0006355|GO:0009725
Trme160998g00001 74 FunFam Auxin response factor 1 52 - -
Trme160998g00001 74 Pfam Auxin response factor 1 25 IPR010525 GO:0003677|GO:0005634|GO:0006355|GO:0009725
Trme160998g00001 74 Gene3D - 1 52 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme160998g00001 Trme-Chr160998 81 464 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme160998g00001 1 74 B3 DNA Binding Superfamily AT1G30330 93.243 4.39e-45 151
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme160998g00001 - - gmx:100777789 166.007