Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme160993g00001 ATGAAGAAGAAATATTACTCTTGGGAGGAGTGTGTAAACCTGAGAGAAGTCAAGTCACTACGAAAAATGACTCACTCAAATGTTGTGAAGCTGAAGGAAGTTATTCGAGAAAGTGACATTCTGTACCTTGTTTTTGAGTACATGGAATGCAACCTCTACCAACTTATGAAAAAAAGGGAAAAGCCGTTTTCTGAAGATGAAGTTAAAAATTTGTGTTTTCAAGTTTTCCAAGGTCTTGCATACATGCACCAGCGTGGATACTTTCATCGTGATCTAAAGCCTG 283 0.3781 MKKKYYSWEECVNLREVKSLRKMTHSNVVKLKEVIRESDILYLVFEYMECNLYQLMKKREKPFSEDEVKNLCFQVFQGLAYMHQRGYFHRDLKP 94
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme160993g00001 94 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 2 94 - -
Trme160993g00001 94 Gene3D Transferase(Phosphotransferase) domain 1 46 94 - -
Trme160993g00001 94 Gene3D Phosphorylase Kinase; domain 1 4 45 - -
Trme160993g00001 94 SUPERFAMILY Protein kinase-like (PK-like) 8 94 IPR011009 -
Trme160993g00001 94 ProSiteProfiles Protein kinase domain profile. 1 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
Trme160993g00001 94 Pfam Protein kinase domain 9 94 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme160993g00001 Trme-Chr160993 44 496 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme160993g00001 11 94 Core Cell Cycle Gene Families AT3G48750 40.698 4.65e-16 69.3
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK CMGC_RCK Trme160993g00001 Pkinase 2.8e-23 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme160993g00001 K08829 - aip:107642397 180.644