Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme160957g00001 GGGTACAAGCGGTTTTTCAGACGAACTTTACTTGAAAGCTCTGATTTCCTCAAGAATGACTGCTTGAAAATCAACTGTACTGTTGGAGTCGTGATTTCTGCTACTGATTGTCCACAACTTAACTCTATTCACGTCCCAGAATCTGACATTGGATCGCACTTTGGCACACTATTGGAAAATATGGAAGGTTCAGATGTTACTTTTGATGTGGCTGGGGAGAAGTTTCCTGGTCATAAGTTGGTGTTAGCTGCGAGATCCCCAGAATTTCGATCTAAATTTTTTAATGGTATGGATACGGAGGACAAACAGGAGATTGTTGTGACAGATCTAGAACCTAAG 339 0.413 GYKRFFRRTLLESSDFLKNDCLKINCTVGVVISATDCPQLNSIHVPESDIGSHFGTLLENMEGSDVTFDVAGEKFPGHKLVLAARSPEFRSKFFNGMDTEDKQEIVVTDLEPK 113
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme160957g00001 113 ProSiteProfiles BTB domain profile. 64 113 IPR000210 GO:0005515
Trme160957g00001 113 SUPERFAMILY TRAF domain-like 1 30 - -
Trme160957g00001 113 CDD MATH 1 28 IPR002083 GO:0005515
Trme160957g00001 113 ProSiteProfiles MATH/TRAF domain profile. 1 28 IPR002083 GO:0005515
Trme160957g00001 113 Pfam BTB/POZ domain 56 112 IPR000210 GO:0005515
Trme160957g00001 113 SUPERFAMILY POZ domain 43 112 IPR011333 -
Trme160957g00001 113 Gene3D Potassium Channel Kv1.1; Chain A 29 113 IPR011333 -
Trme160957g00001 113 PANTHER BTB/POZ AND MATH DOMAIN-CONTAINING PROTEIN 1 1 112 IPR045005 GO:0016567
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme160957g00001 Trme-Chr160957 149 487 Dispersed
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR TRAF Trme160957g00001 BTB 2.4e-11 CL0033
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme160957g00001 K10523 - gmx:100806769 202.216