Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16086g00001 GGTAATACTAGTGGCTGTCCGCGGGAACCATGGCACGACTTGCATTCTAAAATTGATAGTCCAGCAGCTTACGATGTTTTGACAAACTTTGAGGAGCGCTGGTTAAGAGCTGCAAAACCTAAAGGGATAAAAAAGTTGAAGAGTTCATATGATGATGCTTTGCTTAAAATAGAAAGAATTCCAGATATTCTCCGTGTAACAGACATTCCAAGTGTCGGTGATGATAATCCTGCATCTTGGCATACTCAGATATTTCGTTCAATTGATTCAAACTCTGTCAAGGGATTTCCAAAGGAGCCAAAAGATGCATCGCAAAAG 318 0.4057 GNTSGCPREPWHDLHSKIDSPAAYDVLTNFEERWLRAAKPKGIKKLKSSYDDALLKIERIPDILRVTDIPSVGDDNPASWHTQIFRSIDSNSVKGFPKEPKDASQK 106
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16086g00001 106 SUPERFAMILY Phospholipase D/nuclease 3 39 - -
Trme16086g00001 106 PANTHER PHOSPHOLIPASE D 4 104 IPR015679 -
Trme16086g00001 106 Gene3D Endonuclease Chain A 2 59 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16086g00001 Trme-Chr16086 100 781 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16086g00001 1 106 Phospholipase D Gene Family (Wang group) AT4G00240 78.302 7.99e-57 185
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme16086g00001 K01115 - thj:104801467 191.43