Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme160437g00001 ATGCATCAGTACCATCTAGGGACTGATGAAGATGAGAAGAATGGAGAATATGTGGTTTCAAAAATATTTTATAAACAGATTGAGAAAATCGAGGAGAAACCAATGGCTGAAGAACATGATGACAATATAACATTGCGAACAAATCCAAGGACTCCAAAACCAAATCCTCCAAATCCACCGCGCACAGGAAAATGTGTTGAAAATGATGATAACATTGATGAAACTACACTTTTGTCATTTGCAGAGGATGCCAAGTCAATCGCTGTAGAATCACATGCCCCTCAATCTGATATTCAGGATCACGGCAACACAGAAAACTTGGCATGGTTGGCTGGTGTATCACAGGCTATGGAAAAATCCGTATATCATGGCTTAGATGACA 382 0.3953 MHQYHLGTDEDEKNGEYVVSKIFYKQIEKIEEKPMAEEHDDNITLRTNPRTPKPNPPNPPRTGKCVENDDNIDETTLLSFAEDAKSIAVESHAPQSDIQDHGNTENLAWLAGVSQAMEKSVYHGLDD 127
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme160437g00001 127 MobiDBLite consensus disorder prediction 31 46 - -
Trme160437g00001 127 MobiDBLite consensus disorder prediction 31 68 - -
Trme160437g00001 127 PANTHER NAC DOMAIN-CONTAINING PROTEIN 73 1 95 IPR044799 GO:0003700
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme160437g00001 Trme-Chr160437 10 521 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme160437g00001 1 34 NAC Transcription Factor Family AT1G28470 57.895 1.62e-07 46.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme160437g00001 - - mtr:25497909 159.844