Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme16034g00001 CTAGAAAATGGTGATAATTGGAGTGTAGGACAGCGGCAACTTGTTTCTCTTGGTCGAGCCCTACTCAAGCAGTCAAAGATACTTGTACTTGACGAAGCAACAGCATCTGTTGATTCTGCAACTGATAAGCTTATCCAGAAGGTTATCCGAGAAGAGTTCAGAGACTGCACTGTGTGCACTATTGCTCATCGTATTCCTACTGTTATTGACAGTGATCTTGTTCTGGTACTCAGTGATGGTCTAGTTGCAGAGTTTGACACCCCATTGAGGCTATTAGAAGATAAGTCATCCATGTTTTTGAAGTTGGTGACTGAATATTCATCGCGATCAAGTGGCATGCCGGATTTTTAA 351 0.4245 LENGDNWSVGQRQLVSLGRALLKQSKILVLDEATASVDSATDKLIQKVIREEFRDCTVCTIAHRIPTVIDSDLVLVLSDGLVAEFDTPLRLLEDKSSMFLKLVTEYSSRSSGMPDF 116
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme16034g00001 116 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 101 IPR027417 -
Trme16034g00001 116 Gene3D - 1 106 IPR027417 -
Trme16034g00001 116 Pfam ABC transporter 4 35 IPR003439 GO:0005524
Trme16034g00001 116 PANTHER ATP-BINDING CASSETTE SUB-FAMILY C 2 107 - -
Trme16034g00001 116 FunFam AGAP012735-PA 1 108 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme16034g00001 Trme-Chr16034 952 1403 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme16034g00001 2 95 Calmodulin-binding Proteins AT2G36910 31.915 4.38e-14 65.1