Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme160330g00001 AAAGCAGCATTGGCTGAGACATTACGATTGTATCCATCTGTGCCGGAGGATTTTAAATATGCGGTTGAGGATGATGTGTTGCCGGACGGTACGGTGGTTCCGGCGGGTTCAACGGTGACGTATTCAATATATTCAGTTGGGAGAATGAAGAGTGTTTGGGGTGAAGATTGCATGGAATTTAAACCGGAAAGGTGGTTATCGGTTCAAGGAAACCGGTTCGAACCGCCAAAAGATGGTTATAAGTTTGTGGCTTTTAATGCTGGACCGAGAACTTGTTTGGGGAAGGATTTGGCTTATCTTCAAATGAAATCTGTTGCTGCTGCTGTGTTGATTCGTTACCGGCTATTACCGGTTCCCGGTCATAAAGTTCAGCAGAAAATGTCTTTAACACTTTTCATGAAGTATGGGTTACGTGTGTTCTTGTATCCACGTCAGCTTCAGAAACCTGACTCTGCTGTGTCTCATTGA 468 0.4444 KAALAETLRLYPSVPEDFKYAVEDDVLPDGTVVPAGSTVTYSIYSVGRMKSVWGEDCMEFKPERWLSVQGNRFEPPKDGYKFVAFNAGPRTCLGKDLAYLQMKSVAAAVLIRYRLLPVPGHKVQQKMSLTLFMKYGLRVFLYPRQLQKPDSAVSH 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme160330g00001 155 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 85 94 IPR017972 GO:0005506|GO:0016705
Trme160330g00001 155 Pfam Cytochrome P450 2 131 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme160330g00001 155 SUPERFAMILY Cytochrome P450 2 144 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme160330g00001 155 PRINTS E-class P450 group I signature 92 115 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme160330g00001 155 PRINTS E-class P450 group I signature 82 92 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme160330g00001 155 PRINTS E-class P450 group I signature 1 15 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme160330g00001 155 PRINTS P450 superfamily signature 2 13 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme160330g00001 155 PRINTS P450 superfamily signature 83 92 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme160330g00001 155 PRINTS P450 superfamily signature 92 103 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Trme160330g00001 155 PANTHER CYTOCHROME P450 1 138 - -
Trme160330g00001 155 Gene3D Cytochrome P450 1 143 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme160330g00001 Trme-Chr160330 52 519 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme160330g00001 1 144 Cytochrome P450 AT5G58860 82.639 2.44e-87 262
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme160330g00001 K15401 - jre:108980314 275.789