Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme160015g00001 ATGGCAGTTACTACAGTTGATTCTGGTAGCAAGGCTTTAGAGTTTTTGGGTCTATGTGAAAATGATGAGACCAACCCAAATACACCATCTGTCTTTCCTAACAATCATCAGGAAGTGGAAGTGAATCTTGTTATAACAGATTACTGTATGCCTGGCATGACAGGCTATGATTTGCTTAAGAAAATCAAGGAAAAAGGCAACTTTGATAATCCAGAGTTTGACCGGAGATAA 231 0.3853 MAVTTVDSGSKALEFLGLCENDETNPNTPSVFPNNHQEVEVNLVITDYCMPGMTGYDLLKKIKEKGNFDNPEFDRR 76
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme160015g00001 76 Gene3D - 1 73 - -
Trme160015g00001 76 ProSiteProfiles Response regulatory domain profile. 1 76 IPR001789 GO:0000160
Trme160015g00001 76 PANTHER TWO-COMPONENT RESPONSE REGULATOR 3 63 IPR045279 GO:0009736
Trme160015g00001 76 SUPERFAMILY CheY-like 3 68 IPR011006 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme160015g00001 3 68 Response Regulator Gene Family AT2G41310 72.727 5.88e-29 101
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Trme160015g00001 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme160015g00001 K14492 - gmx:100814494 125.176