Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme159696g00001 ATGGTTCGCAACATCGGAATCTCGGCGCACATAGATTCCGGGAATACGACGTTGACGGAGAGGGTACTGTTCTACACTGGTCGGATCCATTCTATCCACGAGGTGAGGGGTAAGGATGGTATCGGTGCGAAGATGGATAAGATGCCATTGGAGATATCTAAGGGAATCACAATTCAATCTGCTGCAACACACTGCACTTGGAAAAACGGTAAGATCAACATAATTGACACACCTGGTCATGTTGATCTGAAGCATTTCTTAACGACAAGACCATTTCAAATGCTGATCTTGAGGGAGCAATTCGTAG 307 0.456 MVRNIGISAHIDSGNTTLTERVLFYTGRIHSIHEVRGKDGIGAKMDKMPLEISKGITIQSAATHCTWKNGKINIIDTPGHVDLKHFLTTRPFQMLILREQFV 102
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme159696g00001 102 Gene3D - 1 89 IPR027417 -
Trme159696g00001 102 ProSiteProfiles Translational (tr)-type guanine nucleotide-binding (G) domain profile. 1 102 IPR000795 GO:0003924|GO:0005525
Trme159696g00001 102 Pfam Elongation factor Tu GTP binding domain 2 82 IPR000795 GO:0003924|GO:0005525
Trme159696g00001 102 PANTHER ELONGATION FACTOR G, MITOCHONDRIAL 2 83 - -
Trme159696g00001 102 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 2 83 IPR027417 -
Trme159696g00001 102 PRINTS GTP-binding elongation factor signature 73 83 IPR000795 GO:0003924|GO:0005525
Trme159696g00001 102 PRINTS GTP-binding elongation factor signature 53 61 IPR000795 GO:0003924|GO:0005525
Trme159696g00001 102 PRINTS GTP-binding elongation factor signature 4 17 IPR000795 GO:0003924|GO:0005525
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme159696g00001 Trme-Chr159696 24 330 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme159696g00001 2 83 Eukaryotic Initiation Factors Gene Family AT3G22980 35.366 2.02e-09 51.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme159696g00001 K02355 - ppp:112272728 146.747