Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme159680g00001 AGGACAACGGGTCCTATAAGGCGTGCTAAGGGTGGTTGGACAGCAGAGGAGGATGAGACTTTGAGGAATGCTGTTGCAGCTTTTAAGGGAAAGCATTGGAAGAAAATAGGTAAGTATTTATATTTAGTATTTACCTGA 138 0.4203 RTTGPIRRAKGGWTAEEDETLRNAVAAFKGKHWKKIGKYLYLVFT 45
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme159680g00001 45 Gene3D - 5 43 - -
Trme159680g00001 45 CDD SANT 13 40 IPR001005 -
Trme159680g00001 45 ProSiteProfiles Myb-like domain profile. 5 45 IPR001005 -
Trme159680g00001 45 Pfam Myb-like DNA-binding domain 10 40 IPR001005 -
Trme159680g00001 45 ProSiteProfiles Myb-type HTH DNA-binding domain profile. 10 45 IPR017930 -
Trme159680g00001 45 SUPERFAMILY Homeodomain-like 6 40 IPR009057 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme159680g00001 1 38 MYB Transcription Factor Family AT3G09370 78.947 3.72e-16 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF MYB-related Trme159680g00001 Myb_DNA-binding 4.9e-07 CL0123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme159680g00001 K09422 - csv:101203548 76.2553