Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme159636g00001 GGTGCTCTGAAGCCAACTGATGTCGAGATGTTGTGGGTTCATGTAACATGCGCTTGGTTTCGACGTGAAGTTGTTTTCCAAGACCCTTTGGCCATGGAACCTGCCCTTGGAATTCTAAGAATTCCTCCTAATTCCTTTGTGAAGGTGAGATGA 153 0.4641 GALKPTDVEMLWVHVTCAWFRREVVFQDPLAMEPALGILRIPPNSFVKVR 50
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme159636g00001 50 ProSiteProfiles Extended PHD (ePHD) domain profile. 1 50 IPR034732 -
Trme159636g00001 50 PANTHER PHD FINGER PROTEINS 1 48 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme159636g00001 Trme-Chr159636 212 364 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme159636g00001 1 33 C2H2 Transcription Factor Family AT3G14740 51.515 6.74e-06 38.9
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme159636g00001 - - gmx:100793624 90.5077