Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Trme15961g00001 GACACAAGGCATGTGAGCTTCAACATCATCTCTGGCACATCCATGTCATGCCCCCATGTAAGTGGGTTAGCTGCTCTTCTTAAAGGAGCTCATCCAGAATGGAGTCCCGCAACTATAAGGTCTGCCCTCATGACCACATCTTACAGAGCCTACAAAAATGGGCAAGCCATAAAAGATGTCGCTACTGGGATACCTGCCACACCGTTTGATTATGGTGCTGGGCACGTGGATCCAGTAGCTGCTCTTGATCCCGGTCTTGTGTATGACACTACCGCGRATGACTACKTGAGCTTCCTCTGTGCCTTGAACTACACTTCATTTCAAATAAAGCTTGTTGCMAAAAGAGAGTTTACCTGTGACAAAAAGATTAAATACAGGGTGGAAGATCTCAATTACCCATCTTTTGCAGTTCCATTTGACACGGCATCAGGAGTAAGAGGTGGTTCTCACAAATCAACTACTGTCCAATACAAGAGGATTTTAACTAACGTAGGGACCCCCGCAACTTACAAAGTTTCAGTGTCATCACAGTCTCCTTCGGTTAAGATTATAGTTGAACCACAGATACTTAGTTTCAAGGCACTGAATGAGAAGAAGAGCTACACTGTTACATTCACGTCTAATTCAATGTCTTCTGGTACAACCAGCTTTGCCCATCTGGAATGGTCGGATGGGAAACATAAGGTCACCAGTCCTATTGCTTTCAGTTGGACTTGA 717 0.4449 DTRHVSFNIISGTSMSCPHVSGLAALLKGAHPEWSPATIRSALMTTSYRAYKNGQAIKDVATGIPATPFDYGAGHVDPVAALDPGLVYDTTABDYXSFLCALNYTSFQIKLVAKREFTCDKKIKYRVEDLNYPSFAVPFDTASGVRGGSHKSTTVQYKRILTNVGTPATYKVSVSSQSPSVKIIVEPQILSFKALNEKKSYTVTFTSNSMSSGTTSFAHLEWSDGKHKVTSPIAFSWT 238
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Trme15961g00001 238 Gene3D - 99 237 - -
Trme15961g00001 238 Pfam Subtilase family 4 73 IPR000209 GO:0006508|GO:0008236
Trme15961g00001 238 Gene3D Peptidase S8/S53 domain 1 98 IPR036852 GO:0004252|GO:0006508
Trme15961g00001 238 FunFam Subtilisin-like protease SBT1.5 99 238 - -
Trme15961g00001 238 Pfam Fibronectin type-III domain 129 234 IPR041469 -
Trme15961g00001 238 ProSiteProfiles Serine proteases, subtilase domain profile. 1 82 - -
Trme15961g00001 238 ProSitePatterns Serine proteases, subtilase family, serine active site. 12 22 IPR023828 -
Trme15961g00001 238 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 5 234 IPR045051 -
Trme15961g00001 238 SUPERFAMILY Subtilisin-like 6 87 IPR036852 GO:0004252|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Trme15961g00001 Trme-Chr15961 2 718 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Trme15961g00001 1 238 Subtilisin-like Serine Gene Family AT5G67360 62.343 5.09e-97 297
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Trme15961g00001 - - gmx:100794284 398.282